KEGG   Thermococcus sibiricus: TSIB_0102
Entry
TSIB_0102         CDS       T00928                                 
Name
(GenBank) Replication factor C large subunit
  KO
K04800  replication factor C large subunit
Organism
tsi  Thermococcus sibiricus
Pathway
tsi03030  DNA replication
Brite
KEGG Orthology (KO) [BR:tsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TSIB_0102
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsi03032]
    TSIB_0102
DNA replication proteins [BR:tsi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     TSIB_0102
SSDB
Motif
Pfam: AAA Rad17 AAA_14 RCF1-5-like_lid AAA_22 nSTAND3 RuvB_N AAA_5 AAA_lid_RFC1 PPV_E1_C nSTAND_NTPase5 DUF815 AAA_16 AAA_33 AAA_assoc_2 AAA_17 Zeta_toxin AAA_28 AAA_25 ABC_tran AAA_19 AAA_11 NPHP3_N TsaE AAA_24 ResIII T2SSE AAA_18 AAA_7 AAA_30 SRP54 AAA_29 Viral_helicase1 DNAX_ATPase_lid
Other DBs
NCBI-ProteinID: ACS89170
UniProt: C6A0M5
LinkDB
Position
103498..104961
AA seq 487 aa
MLPWTEKYRPKRLVDIVNQDKALEKIKPWIEEWLHGIPKKKALLLAGPPGSGKTTTVYAL
ANEYKFEVIELNASDDRTFGKIERYLNAAYTMDVFGRRRKLIFLDEVDNIEPSGAKEIAK
LIGKAQNPIMMSANRYWEVPIEIRNKAEIVQYKRLSQRDILKALFRITKAEGIFVPKEVL
QMIAQRARGDLRAAINDLQTVVSGGVEDAELILAYRDVEKSIFEALGAIFATDNTKRAKM
AIVNLDNTPDEILLWLDENIPYVYYKPEDIAKAYDTISRADIYLGRAKRTGNYGLWKYAM
DMMTAGVAVAGIKKKGFIRFYPPKTLSILRDTKEERSIRDSIVKKIMKGMHMSKLEAIET
MRIFKSIFSSNLDVASHIAVFLELGDKEIEFLTEDKEKVGKIKGKMLSIHKKLKEVKTEL
EIRVEEVMEKIERVEEDTREKEEVKEEVEIEEPEESKEEDLGSKDQITEEKKDKKGKQVT
LFDFLKK
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgctcccttggactgagaagtataggccaaagagacttgtggatattgttaaccaggat
aaggccttagaaaagattaaaccatggattgaagaatggctccatggaattcctaaaaag
aaggctcttctcttggcggggcctccaggtagtgggaaaaccactacagtgtatgcattg
gcaaatgaatataaatttgaggtaattgaactcaatgcaagtgatgacaggactttcggg
aaaatagagcgctatcttaacgctgcatatacaatggacgtttttgggaggagaaggaag
ctcatcttcttggatgaggttgataacatagaaccaagtggggccaaagaaatagccaag
cttataggtaaagcgcagaatccaataatgatgtccgccaacagatactgggaagtcccg
atagaaataaggaataaagcggaaatcgtgcagtataagaggttaagccagagagatatt
ttaaaggcactatttagaataactaaagctgaaggcatttttgttcctaaggaagttctt
caaatgattgcccagagagcaagaggtgatttaagagcggctataaatgacctccaaact
gttgtaagtggtggagtagaggatgcagaacttattttagcttatagggatgttgaaaaa
tctatctttgaagcattaggtgccatatttgcaaccgacaacaccaagagggccaaaatg
gccattgtgaatctggataatactccggatgaaattctcctttggttagatgagaatatc
ccctatgtttattacaaacctgaggacattgcgaaggcttatgatactattagtagagct
gatatctatttagggcgggccaaaagaacaggaaattatggactttggaaatatgccatg
gatatgatgaccgctggagttgcagtggccggcattaaaaagaaaggattcataagattt
tatcctccaaaaacccttagtatattgagggatacaaaagaggaacgttctattagagat
tcaatagtgaaaaaaataatgaaaggaatgcacatgagcaaactcgaggctattgaaacc
atgcgaatatttaagtcaatatttagcagtaatttagatgtagcttcccatatagcagtt
ttcttagaattaggggataaagaaatcgaatttttgactgaagataaagagaaagtaggt
aaaataaagggaaaaatgctctcaatccataaaaaacttaaagaagtgaaaactgagctt
gaaattagagttgaagaggtaatggaaaaaatagaaagagtagaggaggataccagagaa
aaagaggaagtaaaagaagaagtggaaatagaagagcctgaagagagtaaagaagaggat
ttagggtctaaagatcaaattacagaagagaaaaaagacaagaaaggcaaacaggtcact
ttgtttgatttcttaaagaagtga

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