Thermococcus sibiricus: TSIB_0138
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Entry
TSIB_0138 CDS
T00928
Name
(GenBank) Transcription factor TFIID
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
tsi
Thermococcus sibiricus
Pathway
tsi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TSIB_0138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsi03000
]
TSIB_0138
03021 Transcription machinery [BR:
tsi03021
]
TSIB_0138
Transcription factors [BR:
tsi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
TSIB_0138
Transcription machinery [BR:
tsi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
TSIB_0138
RNA polymerase III system
TFIIIB
TSIB_0138
RNA polymerase I system
SL1/TIF-1B
TSIB_0138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
ACS89206
UniProt:
C6A0R1
LinkDB
All DBs
Position
137543..138100
Genome browser
AA seq
185 aa
AA seq
DB search
MSNVELRIENIVASVDLFASLDLEKVIEICPHSKYNPEEFPGIICRFDEPKVALLVFSSG
KLVVTGAKSVDDIQAAVSKLVEMLSKIGTKFGRAPEIDIQNMVFSGDLKMEFNLDAVALV
LPNCEYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSEHDAWEAVKKLLHELDKYGL
IEEEA
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtggaacttagaatagagaatattgttgcttcggtggatctttttgcttca
ttggatcttgagaaggttatagagatatgtccacattctaagtataatccggaagaattt
ccagggataatatgtcgctttgatgaaccaaaagtggcgcttcttgtgttcagttctggg
aagctcgttgtaacaggagcaaaaagcgttgatgacattcaagcagcagtttcaaaactt
gttgaaatgctttcaaagattggaactaaatttggcagagctcctgaaatagatattcaa
aacatggtttttagtggcgatcttaagatggagtttaatctcgatgctgttgcacttgtg
ttgcccaattgtgaatatgagcctgagcagttcccgggtgtcatctatcgtgttaaagac
ccgaaggcggtcatacttctatttagttctggaaaaattgtttgtagcggtgcaaagagt
gaacatgatgcatgggaagctgtcaaaaagctccttcacgagctcgataaatatggcctt
attgaagaagaggcttaa
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