KEGG   Thermococcus sibiricus: TSIB_0165
Entry
TSIB_0165         CDS       T00928                                 
Name
(GenBank) DEAD/H associated family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
tsi  Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:tsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsi03400]
    TSIB_0165
Enzymes [BR:tsi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TSIB_0165
    5.6.2.6  RNA 3'-5' helicase
     TSIB_0165
DNA repair and recombination proteins [BR:tsi03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    TSIB_0165
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PARG_cat_N DUF1424
Other DBs
NCBI-ProteinID: ACS89233
UniProt: C6A0T8
LinkDB
Position
162265..164856
AA seq 863 aa
MIRFATREYSDDEIYAILDEPIREWFKRKFGTFTPPQRYAVVEIHKGENVLISSPTGSGK
TLSAFLAAINELVLLGKEGKLEDKIYVLYVSPLRALNNDIRRNLDEPLSEIRQIYKELGY
ELPEIRVAVRTSDTSSYKKQKMVKKPPHILITTPESLAIALNAPKFSQRLKTVKYVIVDE
VHALAENKRGTHLALSLERLQNLAGDFVRIGLSATIHPLEEVAKFVFGFNDDGTPRSGLV
VDVSFAKQTEIKVESVVEDLIYAPANELSGALYKRLDELIEQHRTTLIFTNTRSGAERVA
YHLKKKYPKYAELIETHHSSLSRDVRLEVEEKLKRGELKSVISSTSLELGIDIGTIDLVV
LIGSPKSVNRALQRIGRAGHRLHEVSRGIILVLDRDDLVECAVLAHNARSRRLDRIKIPQ
NPLDVLVQHVLGIALERVWDINEAYNLVRRAYPYRNLSFDDFVSVLRYLAGEYAGLEEKK
VYAKVWFDEEEGKFGRRGKMTRAIYYMNTGTIPDEAKIEVFTLDKHFIGTVEEEFAERLM
PGDIFVLSGRTYEFKKSRANRVYVQPKEGAKPTIPAWFSEMLPLSFDLALDVQRFRREVK
ALLSSKRAKSLLIRKYKIDEKAARAILGYFREQERYSTIPDDELLLVEGIFDERRVKYFF
HTLIGRRANEALSRAFAYIISKKKKTNVGIAISDNGFMLILPKEKILNEEEIRELFQIEN
VRETLKRALDNTELLKRRFRHVANRGLLILRRYMGRKKSLSRQQLNAQTLLRLLKKNYPD
FPLLKEVYREIMEDKMDIENAELFLSWVKEGKIKVVVEHNELPSPFAFNLEVIGASDVVL
MEDRRELIKQLHSKIMKLIGEKV
NT seq 2592 nt   +upstreamnt  +downstreamnt
atgataaggtttgctaccagggaatacagcgatgatgaaatttatgctatactggatgaa
cctattagagaatggtttaaacggaaatttggaacatttacacccccccagagatatgca
gttgttgagattcacaagggggagaatgttcttatatcttcaccaacgggtagtgggaaa
actttatccgcttttctcgccgccataaatgagcttgttcttctgggaaaagaaggtaag
cttgaagacaagatttacgttctctatgtatctccacttagggccttgaacaatgatata
aggaggaaccttgatgagccgttgagtgagataagacaaatttataaggaactgggctat
gagcttccagaaataagggttgcagtgaggacaagtgacacatcaagctataaaaagcag
aaaatggtaaaaaagccacctcatattttgataacaactcccgaaagcttggctatagct
ctaaatgctcccaagttcagtcagaggttaaaaacagtcaaatatgttatcgttgatgag
gtccacgctttagctgagaacaagagagggactcatttggctctgagtttagaacggctc
caaaatctggctggtgattttgttagaattggcttaagcgcaacgatacaccctctagaa
gaagttgctaaatttgtttttggctttaatgatgatggtactcctcgttccggtttagtt
gtagatgttagctttgcaaagcagactgaaatcaaagttgagagcgtggtggaagactta
atctatgccccagctaatgagctgagtggggctctatataaacgcttggatgaacttata
gagcagcatagaacaacgttaatatttacaaacacgaggagcggggctgaaagggttgca
tatcaccttaagaaaaagtatcctaaatatgcggaattaattgaaactcaccattcgagc
ctttctagggacgttaggcttgaagtagaggagaaattgaagagaggagagttgaaatca
gtgatcagctcaaccagtttggagctcgggattgacataggcacaatagatttggttgtc
ctcattggctcaccaaagagtgttaatagagcacttcaaagaatcggaagggcaggtcat
aggttgcatgaggtaagtagggggataatcctcgttttggatagggatgatttggtggaa
tgtgctgttttagcacataatgcaagaagtaggaggcttgacaggattaaaattccccaa
aatccactggatgtccttgtgcaacatgtgcttgggatagctctggaaagggtgtgggat
ataaatgaagcatacaaccttgttagaagggcatatccatatcgtaatttaagctttgat
gactttgtgagtgttttacgttacttggctggcgaatatgcaggtttggaagagaagaaa
gtctatgcaaaggtctggtttgatgaagaagaagggaaatttggtagaaggggcaaaatg
acacgggccatctactatatgaacaccgggacaatcccagatgaggcaaaaatcgaagtt
tttacccttgataagcattttattggaactgttgaagaagaatttgcagaaagattaatg
ccgggggatatttttgttctgtctggcagaacctacgaatttaaaaaatcaagagcgaat
agagtttatgttcagccaaaggaaggagcaaagccaacaattccagcatggttttctgaa
atgctgcccttaagttttgacctagctttggacgtgcagcgttttagaagagaggttaag
gcccttctaagcagtaaaagagcaaagtcgcttctcataagaaagtacaaaattgatgaa
aaggccgcaagggccattttggggtattttagagaacaggagaggtattcaactatccca
gatgacgaacttcttcttgttgaggggatctttgatgaaaggagagttaaatacttcttc
cacacactgatagggagaagggccaatgaagctttgagcagggcctttgcctacatcatc
agcaaaaagaagaaaacgaatgttggaatagcaataagtgataacgggttcatgcttatc
cttcctaaggaaaagatcttaaacgaggaagaaattagggagctatttcagattgagaat
gtgagggaaaccttaaagagagcattggacaatacagagcttttaaagagacgtttcagg
catgtagcaaacagaggtttgcttattcttagaagatatatggggagaaagaagagctta
agcagacagcagttaaatgcacaaactctcttgaggcttttgaagaaaaactacccagat
tttccacttttgaaagaagtttacagggagataatggaggataagatggatatagagaat
gcagaactcttcttgagctgggttaaggaaggaaagataaaagtggtggtagagcataat
gaattgccctcgccttttgcctttaatcttgaagtgattggagctagtgatgttgtgctg
atggaggacagaagggagcttatcaaacagctgcacagcaaaatcatgaagctaataggg
gaaaaggtttaa

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