Thermococcus sibiricus: TSIB_0389
Help
Entry
TSIB_0389 CDS
T00928
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
tsi
Thermococcus sibiricus
Pathway
tsi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
TSIB_0389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsi03021
]
TSIB_0389
Enzymes [BR:
tsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
TSIB_0389
Transcription machinery [BR:
tsi03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
TSIB_0389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
Motif
Other DBs
NCBI-ProteinID:
ACS89455
UniProt:
C6A1G0
LinkDB
All DBs
Position
375062..377779
Genome browser
AA seq
905 aa
AA seq
DB search
MHSMKKVIGSIEFGVLSPQEIRKMSAAEITVPDTYSEDGYPIDGGLMDRRLGVIDPNLRC
ETCGANYKECPGHFGHIELARPVIHVGFAKTIYRTLESTCRECGRIKLTDEEIEDYFGKL
NINEARKSEIDALISEIHKKAKERMVCPHCGAPQFSIKFERPTIYWELRTDEEGNEYRHR
MMPSEIRDRLEKIPDKDLPLLGLNPENSRPEWMVLTVLPVPPVSVRPSITLESGIRAEDD
LTHKLVDIIRINARLKQNIEAGAPQLIIEDLWDLLQYHVTTYFDNETSGIPPAKHKSGRP
LKTLAQRLKGKEGRFRKNLSGKRVNFSARTVISPDPMISINEVGVPLIVAMELTVPEKVT
DFNLEKLRKMILNGPEKYPGANYVIDPQGRRIRLMESNLETIADMIDIGWTVERHLMNGD
VVLFNRQPSLHRMSIMAHRVRVMPYKTFRLNLAVCPPYNADFDGDEMNLHVPQTEEAQAE
ARILMEVQNHILSPRYGGPIIGGIQDHISGGYLLTREGAYFTKYEVEHMLMFAGVEVKEL
PKPDKVENGIEYWSGKTVFSLLLPENLTIWYRNKLCDDPSQCEPIEKLIEEKLIPSEKEV
KKVATDGFVYILKGKLLSGAIDKKAYGREDGELLNIIVREYGVERARQFLDQVTKLAIWV
ITHKGFTTGIDDEDLPGEAKARIKEIIMEAEGKVQRLIEAYKNGELEPLPGKTLEETLES
RIMAVLSEARDNAGKVAERYLGMNNHTVIMAKTGARGKILNITQMAAILGQQSIRGKRLY
RGYRSRVLSHFKAGDLGARAKGFIVNSYKSGLTPQEYFFHAMGGREGLVDTAVRTAQSGY
MQRRLINALQDLKVDYDGTVRDPTGIVVQFRYGEDGVDPMKSWGGRTVNIDRIVTRTLIK
LREKG
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgcactcaatgaaaaaagttattggaagtattgagtttggtgtgctttcccctcaagag
attagaaaaatgagtgctgcggagataacagtccctgatacctattcagaagacggttat
ccaatagatgggggcctaatggacagaagattaggagttatagatcccaaccttagatgt
gagacatgtggggccaattataaagagtgtcctggacattttggtcatatagagcttgca
agaccagttattcatgttggatttgctaaaacaatttacagaacattggaaagtacttgt
agagaatgtggaaggattaagttaacggatgaagaaattgaagactatttcggtaaatta
aatataaatgaggctagaaaaagtgagattgatgcgttaatatcagagatacacaaaaag
gcaaaagaaagaatggtatgtcctcattgcggggctcctcaattttcaattaaatttgag
agaccaacaatatactgggaattgaggactgatgaagaaggaaacgaatacaggcacaga
atgatgccaagtgagataagagacaggcttgagaaaatcccagataaggacttacccctc
ttaggccttaatccggaaaattcaagacccgaatggatggttctcacggttttgcccgtt
cctccagttagtgtaaggccttcaataacacttgagagtggtataagagctgaagatgac
cttactcataagcttgtagatatcataagaattaatgcacgtttgaagcaaaacatcgaa
gctggagctccacaacttattatcgaagatctttgggatctccttcaatatcacgttacc
acatacttcgacaatgagacttcaggtattcctccagcaaagcacaagagtggaaggcca
cttaaaacccttgcccaaagacttaagggtaaagagggtagattcaggaaaaaccttagt
ggtaaacgtgttaatttctcggcccgtacggtaattagtcctgaccccatgataagcata
aatgaagtaggtgttccattaatcgttgcaatggaacttacagttccagagaaagtgact
gacttcaatcttgaaaagctcagaaaaatgatccttaatggtccagaaaagtatccagga
gctaattatgttatagatccacaaggtagaagaattcgtcttatggagagcaatctagag
acaatagctgacatgattgacattgggtggacagttgaaaggcaccttatgaatggagat
gttgtattatttaacagacaaccatctcttcacagaatgagtattatggctcatagagtt
agagtaatgccatataaaacatttaggcttaatttggcagtttgcccgccatataacgct
gactttgatggggacgaaatgaatcttcacgttccacaaacagaagaagctcaggcagaa
gccagaattttaatggaagtccaaaaccacatcttatctccgagatatggtggaccaatt
attggtggaattcaggatcatatatcaggagggtacctcctgactagagagggggcatac
ttcaccaaatatgaagtggagcatatgttaatgtttgcaggggttgaagtaaaagaactt
ccaaagccagataaagttgagaatggcattgagtattggagtggaaagaccgtattctca
cttctacttcctgaaaacttgacgatatggtacaggaacaagctatgtgatgatccttcc
caatgtgagcctattgaaaaacttattgaggagaagctaatcccaagtgagaaagaagtt
aaaaaagtggccacagatggctttgtttatattttaaaaggtaagttattaagtggtgca
atagacaaaaaagcttacggtagagaagatggggagctacttaatattatagttagagag
tatggtgtagaaagggccagacaattccttgatcaagtaacaaaactagcaatatgggta
atcacccataagggattcaccactggaatagatgatgaagatcttccgggcgaggccaag
gctagaattaaagaaataataatggaagcagagggtaaagtgcaaagactgatagaagca
tataaaaacggagagctggaacccctgcctggtaagactttggaagaaactctcgaaagc
agaataatggctgttctatctgaagcgagagataatgctggtaaagttgctgagagatat
ttgggtatgaacaaccatacagtaatcatggccaaaaccggggcaagaggtaaaatcctt
aacattactcaaatggcagccatacttggacagcagtctattagaggtaagagactttat
agaggttacaggagcagggtattgagtcacttcaaagctggtgaccttggtgcaagggca
aaaggtttcatcgttaactcatataagagcggtctaacaccccaagaatacttcttccat
gcaatgggtggtagagaaggtctcgttgatactgcagttagaacggctcaaagcggttat
atgcagcgtagacttataaatgctctacaagacctcaaagtagattatgatggaactgtg
agagatccaacaggaattgtagttcagttcaggtatggtgaagatggtgtagacccaatg
aagagttggggtggaagaacggtaaatattgatagaattgtgacaagaacattgataaaa
ctcagggagaaggggtga
DBGET
integrated database retrieval system
