Thermococcus sibiricus: TSIB_0527
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Entry
TSIB_0527 CDS
T00928
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
tsi
Thermococcus sibiricus
Pathway
tsi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TSIB_0527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsi03021
]
TSIB_0527
Transcription machinery [BR:
tsi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
TSIB_0527
Prokaryotic type
Archaeal type
TFB
TSIB_0527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
Sigma70_r4
Zn_Ribbon_Prim
A2L_zn_ribbon
HTH_Tnp_ISL3
Trm112p
Zn_ribbon_LysW
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
FtrD-like
RB_B
Lar_restr_allev
FYDLN_acid
ORC6
Zn_ribbon_IS1595
Auto_anti-p27
RPA_interact_C
Motif
Other DBs
NCBI-ProteinID:
ACS89593
UniProt:
C6A1U8
LinkDB
All DBs
Position
492769..493668
Genome browser
AA seq
299 aa
AA seq
DB search
MTKHRVCPVCGSDKFVYDPERGEIICANCGFVIQENIIDMGPEWRAFDASQREKRSRTGA
PESILLHDKGLSTDIGYDRNVKGLMREKIYRLRKWQSRLRVSDAAERNLAFALSELDRLG
ARLNLPKHVEEEAARLYRDAVKKGLIRGRSIESVIAACVYAACRLLKIPRTLDEIADMAK
VDKKEIGRSFRFIARNLNLTPKKLFVKPTDYVNKFADELGLSERTRRRAIELLDQVYNMG
LTSGKSPAGLVAAALYIAGLLEGEKRTQREVAEAARVTEVTVRNRYKEMVEKLGLKLPI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgactaagcatagggtttgcccagtttgcggctccgataagtttgtttacgacccggaa
aggggtgaaataatctgtgcaaactgtggatttgtaattcaagagaatataattgacatg
ggccctgaatggagagcttttgatgcttctcaaagagaaaaacgctccagaactggtgca
ccagaaagcattttgcttcatgataaaggtctttcaacagatataggctatgacaggaat
gttaaggggttaatgagagaaaaaatataccgtcttaggaaatggcagagcagacttagg
gttagtgacgccgcggagagaaatcttgcgtttgccttaagcgagcttgatagacttggt
gcgagattaaatctcccaaaacacgttgaagaagaagcagcccgtttatatagagatgcc
gttaaaaaaggccttataaggggaaggtcaattgagagcgttatcgcagcttgcgtttac
gctgcttgcaggttgctaaaaatccccagaactctagacgaaatcgctgacatggctaaa
gttgataaaaaagagattggaaggagctttagatttatcgcgagaaatctcaatcttact
ccaaagaaactttttgtcaaaccaacagattatgtgaacaagtttgctgatgagcttggt
cttagtgaaagaactagaagaagggcaattgagcttttagaccaagtttataacatgggt
cttacaagtggaaagagtcctgcggggttagttgcggctgcattatatattgcaggactt
ttagagggagaaaaaaggactcaaagagaagttgcagaggcagcaagggtaactgaggta
acagtgagaaataggtataaggaaatggttgaaaagcttggattaaagcttcctatttag
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