Thermococcus sibiricus: TSIB_0555
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Entry
TSIB_0555 CDS
T00928
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tsi
Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsi03400
]
TSIB_0555
DNA repair and recombination proteins [BR:
tsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
TSIB_0555
Archaeal homologous recombinant proteins
TSIB_0555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Baculo_PEP_C
Rad50_zn_hook
ATG17_like
AAA_21
AAA_13
DUF1664
NPV_P10
SbcC_Walker_B
AAA_15
Mce4_CUP1
Uso1_p115_C
Laminin_II
Prominin
GAS
CorA
PLU-1
Seryl_tRNA_N
Sec3_CC
YkyA
CCDC22_CC
DUF6262
COG3_N
DUF713
Sec8_N
BORCS6
DUF16
FUSC
DUF3287
OrfB_IS605
CENP-F_leu_zip
ATG16
TPR_MLP1_2
DUF948
DUF4407
BLOC1_2
Syntaxin-6_N
WXG100
Syntaxin_2
DUF4201
Fez1
EzrA
MCPsignal
PRT_C
Fib_alpha
DUF3251
SKA1
Sigma70_ner
Motif
Other DBs
NCBI-ProteinID:
ACS89620
UniProt:
C6A1X5
LinkDB
All DBs
Position
complement(522712..525123)
Genome browser
AA seq
803 aa
AA seq
DB search
MEFEEGGVPYRIFWERKKDGAPVYKLYRADEGILIAEGVYEVQTQLKAITGLDRDSAINS
ILIRQGEITSLLDQAPAKRKEVIGRLLGLEKLEKAWQFMREVIYYFEQVKNELEKEIAEI
EGKLKSKYEQRDKLKQEIQELNRQIKELKQKLKSLSQQLSAIERELNELNAKEKRYNELM
LELTKIIESIRLVQEQIKKLEEDLNESKKAKEKLKELEGEIRKIPLLEEYIKQFNKFKEL
NTKKEQLEKDLNKISAIREEANKAMKSCKVYVEYIEVGEEFIEVPTDLSEIEKSTTTIST
LVRSTVAQIKKDTEELEKLISEALKFLPEPTIEAKEKKLKELKEEEKRLENIVSGLRKEL
GEVSGRINDLRKALDMLGESEACPVCKTKLTPEHRDRVKHEMEEEIKSLEEIVKQIRREI
EEAENQKRTIKEEIERVSKINVERIEQLQKEIEEMKEKLAKHYTELEGIITELNNLENDI
RPKISEIESEIKEIEERLNELIEEIGEKPEDPENELKELRKKKEEYDRLKPIADRYEKLL
EDIKEAQEKLRKLENKKHELQEEIKKLGYDKQHHEKVRKEHEELLRKFESTKTELEEKTK
SLEKNLKDLTEVEAEIKELEEKRNNLKAELDKIKKLLNDLERIRRAYHRDGVQRLLRQKI
APIISELATGYIENFNMDITDIYLSEDFDITVVKNSVEVPISTLSGGEKVAVALALRLAI
ARALSKSLSIVIMDEPTTHLDEERRKDLVEILDRFFKSEGAIPQVVIVTHHPELETVADT
LYLIRNVAGVSQVQEVESLESRL
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
ttggagttcgaagagggaggagtcccctaccgcatattctgggagagaaaaaaagatgga
gctccagtttacaaactttacagagccgatgagggaatattaatagccgaaggggtctac
gaagtccaaacacaactcaaggcaataactggcctcgatagagattcggcaattaactcc
attctgatcaggcagggagagataacttctttactagaccaagcaccggcaaaaagaaaa
gaggtcatcggaagactgctagggttagaaaagttagagaaagcctggcagtttatgaga
gaagtaatttactactttgaacaagttaaaaatgagttggaaaaagagatcgcagaaatt
gaaggaaaattaaagagtaaatatgaacagagagacaaactcaaacaagaaatacaagag
ttaaacaggcaaataaaagagcttaaacaaaaattaaaaagccttagtcaacaacttagt
gctattgaacgagagttgaacgaattaaatgcgaaagaaaagagatacaatgagctaatg
ctagagttaaccaaaataattgaaagcataagattagtacaggaacaaattaagaaactc
gaagaagacctaaatgaatccaaaaaggccaaagagaaattgaaggaattagagggagaa
ataagaaaaatacctcttttggaggagtacattaaacagtttaacaaattcaaggagtta
aatacaaaaaaagaacagttagagaaggatttgaacaaaatatcagccataagagaggaa
gctaataaggcaatgaaatcgtgtaaggtgtatgttgaatacatagaagttggcgaggag
ttcatagaggtaccaacagacttatcagagattgaaaaatccactacaacaatttccaca
ctagtaagaagcactgtagcccaaataaagaaggacacagaagagcttgaaaaattgatt
tctgaagctctaaagtttttacccgagccaacaattgaagctaaagagaagaaattgaag
gagcttaaagaggaggagaaaaggctagaaaatattgtatctggcctaaggaaagaactc
ggtgaagtatcgggaagaataaatgacttaagaaaagcattggacatgctcggtgaatca
gaggcatgccccgtttgtaaaacaaaactaaccccggaacatagagatagagtaaagcat
gaaatggaggaagaaataaaatctttagaagaaatagtgaaacaaattagaagagaaatt
gaggaagcggagaatcaaaagaggacaataaaagaagaaattgaacgtgtatctaaaata
aacgtagagcgcattgagcaattacaaaaagagatagaggagatgaaagaaaaacttgcg
aagcattacacagaattggaaggaataataacggaacttaataatctcgaaaatgacatc
agaccaaaaatttcagagatcgaatcggagataaaagagattgaggagaggctcaatgag
cttattgaagagatcggagagaagcccgaagatccggaaaatgaactgaaggaattaaga
aagaaaaaggaagaatatgataggctaaagccaatcgcagatagatatgaaaaattgctc
gaagatatcaaagaagcacaggaaaaactaagaaaactagaaaataagaaacatgagctc
caagaagagattaaaaaacttggatacgataagcaacaccatgagaaagttagaaaagaa
cacgaagaactattaagaaaatttgagagtactaaaactgaactcgaagagaagactaaa
tcattagaaaagaacttaaaagatctaactgaagtggaagcggaaataaaagagctcgaa
gaaaaacgtaataatctcaaggcagagctagataagattaaaaagctcctaaatgattta
gagcgtattaggcgcgcctatcatcgtgacggtgttcaaagactcctgcggcaaaaaata
gccccaattatctccgagttagcaacgggatacatcgagaactttaatatggacatcaca
gacatctatttaagcgaagattttgacataactgttgtaaagaactctgtggaagttcca
atatctaccttaagtggtggtgaaaaagtcgccgttgcactagcgttaaggctagcaata
gctcgggccctttcgaaaagtctatcgatagtcataatggacgaaccaacaactcactta
gacgaagagcgtagaaaagaccttgtggagatactggacaggttctttaagtcggaagga
gccattccacaggttgtgatagttactcaccatccagaacttgaaacagtagctgacact
ctttatctcatcagaaacgtagccggtgtttcccaagtgcaggaagtggaaagtttggaa
agtaggctttaa
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