KEGG   Thermococcus sibiricus: TSIB_0565
Entry
TSIB_0565         CDS       T00928                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
tsi  Thermococcus sibiricus
Pathway
tsi03030  DNA replication
tsi03410  Base excision repair
tsi03420  Nucleotide excision repair
tsi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tsi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    TSIB_0565
   03410 Base excision repair
    TSIB_0565
   03420 Nucleotide excision repair
    TSIB_0565
   03430 Mismatch repair
    TSIB_0565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsi03032]
    TSIB_0565
   03400 DNA repair and recombination proteins [BR:tsi03400]
    TSIB_0565
DNA replication proteins [BR:tsi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    TSIB_0565
DNA repair and recombination proteins [BR:tsi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     TSIB_0565
   MMR (mismatch excision repair)
    Other MMR factors
     TSIB_0565
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    TSIB_0565
SSDB
Motif
Pfam: PCNA_N Rad1 PCNA_C Rad9
Other DBs
NCBI-ProteinID: ACS89630
UniProt: C6A1Y5
LinkDB
Position
532403..533152
AA seq 249 aa
MPFEIVFDGAKEFADLIDTASNLIDEAAFKIAEEGMSMRAMDPSRVVLLDLNLPASIFSK
YDIDGEETVGVNMDHFKKVLKRGKGKDILVLRKGEENFLEITLEGTAKRTFRLPLIEVEE
LELDLPELPFTVRAVILGEVLKEAVKDASLVSDSIKFIAKENEFIMKAEGETQEVEIKLT
LEDEGLLDLNVEEETKSAYGVSYLADMAKGIGKADEVVLRFGNEMPLQMDYPIRDEGRLT
FLLAPRVEE
NT seq 750 nt   +upstreamnt  +downstreamnt
atgccatttgagatagtttttgatggggcaaaagaatttgcggacttgatagacacagca
agcaatttaattgatgaagctgcgttcaaaatcgctgaagaaggtatgtcaatgagggca
atggaccctagtagggtggttttacttgacctcaatcttcccgctagcatttttagtaaa
tatgatattgatggggaggaaacggtaggagttaacatggatcacttcaaaaaggttctt
aaaagaggaaagggtaaggatatccttgttttgaggaaaggtgaggagaactttcttgag
atcactctagaaggcactgcaaaaagaactttcagactcccattgattgaagtcgaagag
cttgaactcgatcttccagagcttccattcacagtgagagcagttatacttggagaagtt
ctgaaagaagctgtaaaagatgcttctcttgttagtgacagcataaagttcattgcgaag
gaaaatgagttcattatgaaagctgaaggggaaacccaagaagttgagattaaactcact
cttgaagatgaggggttacttgatttgaatgttgaagaagaaaccaagagtgcatatggt
gtcagttacctggctgatatggccaagggaattggaaaagcggatgaggttgtactcagg
tttggaaatgaaatgccccttcaaatggattatccaataagggatgaaggaagactcaca
ttcttgttggctcctcgtgttgaggagtga

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