Thermococcus sibiricus: TSIB_0627
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Entry
TSIB_0627 CDS
T00928
Name
(GenBank) Transcription regulator, Lrp/AsnC family
KO
K03718
Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
Organism
tsi
Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsi03000
]
TSIB_0627
Transcription factors [BR:
tsi03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
TSIB_0627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
TrmB
HTH_5
HTH_IclR
HTH_11
NapD
HTH_27
HTH_Crp_2
HTH_20
LexA_DNA_bind
HTH_Mga
AsnC_trans_reg_3
HTH_28
MarR
HTH_23
HTH_36
AsnC_trans_reg2
DUF7343
HTH_10
HTH_DeoR
HTH_50
Penicillinase_R
HTH_40
Fe_dep_repress
HTH_Cmi2_C
B-block_TFIIIC
Rrf2
DDRGK
DnaD_N
HTH_29
HTH_9
Sigma70_r4_2
Mga
Motif
Other DBs
NCBI-ProteinID:
ACS89692
UniProt:
C6A247
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Position
complement(584985..585452)
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AA seq
155 aa
AA seq
DB search
MDGESMRGILDETDKEILKVLQKNSRTPLREISKRVGLAESTVYERIKKLKEKGVIKKFT
IIPDPEALGFNLLAFILIKARAGKYADVAKELVKYPEIVEIYENTGDYDMILKIRTRNST
ELNEFLNKIGEIDGVVATHTMVVLKTHKETTELPI
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
ttggatggtgagagtatgagagggattttagatgagaccgataaagaaatcttaaaggtg
cttcaaaaaaatagccgtacccccctaagagagatctctaagcgtgttggtctagccgaa
tcaacagtatatgaacgaataaaaaagctaaaagaaaaaggagtgataaaaaagttcaca
atcatcccagatccggaagcacttggctttaacttattggcctttattctcattaaagct
agagcgggaaaatacgcagatgtcgcaaaagaacttgttaaatatcccgaaattgttgaa
atatacgaaaacacaggcgactatgatatgatacttaaaatacggaccagaaacagcaca
gaactaaatgagttcctcaataaaattggagaaatagatggcgtcgtggcaactcataca
atggtagtattgaaaactcacaaagagacaacagaactccctatctga
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