Thermococcus sibiricus: TSIB_1196
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Entry
TSIB_1196 CDS
T00928
Name
(GenBank) Putative HTH-type transcriptional regulatory protein TK0539
KO
K07728
putative transcriptional regulator
Organism
tsi
Thermococcus sibiricus
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsi03000
]
TSIB_1196
Transcription factors [BR:
tsi03000
]
Prokaryotic type
Helix-turn-helix
Other families
TSIB_1196
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_17
MerR
HTH_11
HTH_28
HTH_25
HTH_8
HTH_26
MerR_1
GP3_package
HTH_23
DUF1870
Xre-like-HTH
Sigma70_r4_2
YdaS_toxin
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
ACS90250
UniProt:
C6A3Q5
LinkDB
All DBs
Position
complement(1088261..1089220)
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AA seq
319 aa
AA seq
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MMEKERLLRIVEGIFKGTGFKVARMEFRGSCFDLAASRLFLLLFVKILQNIDSLTEEQAE
DLKRLAKLFEASPLIVGFRSKNEELEEGVVYERHGIHALNPQTLYNALVENELPAIFAER
GGFYVKVNGKYLRELRESHGYSVGELAELLGVSRKSLQNYEKGEQAMSLEIALRLEELFD
APVAKPIDILNSKVEAKMNVEPETELEKEIFNRLETFGMRVVKIKKAPFDAISREEGLKI
LTGISERRTTSTLKRAQMVNEVSKIIHSDGLFILKKTKTEVVGEIPLIPKNKLDEIKDAD
ELMEMIEELKKEIKRKIFS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaagaaagattattgcggattgttgaaggtatcttcaaaggcactggattt
aaagttgctagaatggaatttagagggtcatgctttgatttagccgctagtaggcttttt
ctgctcttgtttgtgaagattcttcagaatattgattctctcactgaagaacaggcggaa
gatttaaagagattggcaaagctgttcgaggcctctcccctaattgtaggctttaggtca
aaaaatgaggaacttgaggaaggggttgtatatgaaaggcatggtattcatgctttaaac
cctcaaacactttataatgctcttgtagagaatgaactcccagcaattttcgctgaaaga
ggaggattttatgttaaggttaatggaaaatacctacgagagcttagagagagtcatgga
tatagtgttggagaactggccgaattgctgggagtctcgagaaaaagtcttcaaaactat
gaaaaaggagagcaggctatgagtcttgaaattgctcttaggttagaggaactttttgat
gctcctgtagcgaaacctattgatattcttaactcaaaagtagaagcaaaaatgaatgtg
gaaccggagactgaattggagaaggagatttttaatcgcttggagacatttggaatgaga
gttgttaagattaaaaaagctccgtttgatgcaatttccagagaagaaggattaaagatt
cttactggtataagtgagagaagaacaacttcaacactcaaaagagctcaaatggtaaat
gaagtgagtaagatcattcatagcgatggtctttttatcctcaaaaaaacaaaaactgaa
gtggttggagagataccattaattccaaagaacaagcttgatgaaatcaaagatgcagat
gagttaatggaaatgattgaagagcttaaaaaagagataaagaggaagatattcagctga
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