| Entry |
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| Name |
(GenBank) ERCC2/XPD/Rad3-related DNA repair helicase
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| KO |
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| Organism |
tsi Thermococcus sibiricus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:tsi00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TSIB_1213
09124 Replication and repair
03420 Nucleotide excision repair
TSIB_1213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:tsi03021]
TSIB_1213
03036 Chromosome and associated proteins [BR:tsi03036]
TSIB_1213
03400 DNA repair and recombination proteins [BR:tsi03400]
TSIB_1213
Enzymes [BR:tsi01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
TSIB_1213
Transcription machinery [BR:tsi03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
TSIB_1213
Chromosome and associated proteins [BR:tsi03036]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
TSIB_1213
DNA repair and recombination proteins [BR:tsi03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
TSIB_1213
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1103756..1105687)
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| AA seq |
643 aa
MSEYFPYQSLRPNQEDFIKLVDTVVRNGENLVIEAPTGFGKTISVLAGALPYAKEMGYKI
IYLARTHKQMDRVIEELKAISNKTQVSGVEFRSRKELCLHQYVQNFAPDAYNAMIVCKNL
KKLGKCEFFENLKKKKEEFDELAQYFVQKPAEPMMILTHSKMLDFCPYELTRKIAFNSDV
IVASYLYMIDPAIRENFMAYFDFDYSDLIVIFDEAHNLPNQAINALSDRLSVYSINRAIK
EADEYKEHEIANFLSIFLKGLENLYQEKLRDLKIDEVPIIPESIFYHVFDVLKINEKQLI
RILDQMVKAGDAIREDKIERSLPPRSYVGRVGEFLLLWFALIGKEDYLFLMSREKGFSLE
LVALDPSKALSFVKNVQSAIFMSGTMTPLEAFADIMGIEGKLKKFPRIVKKENAIVLVAK
DVSTRGDERSLELYKKMAKYIVEAVKLIPKNVGVFTASYEVLEGLLSANVDIQIQEVSGK
KVFIEKRGASSKENDLLVMAFKEEAKRDGAVLLGVMGGRNSEGQDYSGDEMNGVILVGIP
YARPTPKVQAQIRYFENKFPRKGRYYGYVLPAHKKLVQAAGRVHRSEEEKGAVVVLDYRL
LWSNVRKDLPDWMKETIKPVTLASMKRHLIDFYRGEKIKVEKD |
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| NT seq |
1932 nt +upstreamnt +downstreamnt
atgagcgaatatttcccatatcaatccttgaggcccaatcaagaggatttcattaagttg
gtggatactgtcgttagaaatggagaaaacctggttattgaggcccccactggctttgga
aagacaataagtgtgctggcaggagcattgccgtatgccaaagagatggggtacaagatt
atctatctcgcaaggacacacaagcaaatggaccgggtaattgaggaacttaaagccata
agtaacaaaactcaggtaagtggtgttgagtttagaagtaggaaagagctctgtctccac
caatacgtccagaactttgctccggatgcatataatgcaatgattgtttgtaaaaacctt
aaaaaacttggaaaatgtgagttttttgaaaacctgaagaaaaagaaggaagaatttgat
gaacttgctcagtatttcgtacaaaaacctgctgaacctatgatgatattaacccattca
aaaatgcttgacttctgtccgtatgagcttactagaaaaatagcctttaattccgacgta
atcgtagctagttacctttacatgattgatccagctattagagaaaactttatggcatat
tttgactttgactattctgatctcattgtaatatttgatgaggcccataatttgcctaat
caggccataaatgctttaagtgatagattaagtgtttatagtattaacagggctataaaa
gaagccgatgagtataaagaacatgaaattgccaacttccttagtatattcttaaaaggg
ctggaaaatctgtatcaagaaaaattgagagatcttaaaattgatgaagtcccaataatt
ccagagagtatattttaccatgtttttgatgttttaaaaataaatgaaaaacaattgatt
aggattttggatcaaatggtgaaggcgggtgatgcaataagagaagacaaaattgagaga
agccttcctccgaggagctatgttggtagggttggagagttcttattgttgtggtttgca
ctcattggtaaggaggattatctgttcttgatgagtcgagaaaaaggattttccctggaa
cttgtagctcttgatccttcaaaggccttgagttttgttaagaacgttcaatcagcgatt
ttcatgtctggaaccatgacgccattggaggcttttgctgatattatgggcatagagggg
aagctgaagaagttcccaagaattgtaaaaaaagagaatgccattgttcttgttgctaaa
gatgtttctacacggggtgatgaaagaagtttggagctctataaaaaaatggctaaatat
attgtggaagctgtaaagctcatcccaaagaatgttggggtttttacggcgtcttatgag
gttcttgagggtcttttgtctgcaaatgtggatattcagattcaggaggttagtggaaag
aaagtattcatagagaagagaggcgcttcttccaaagaaaacgatcttcttgtgatggca
tttaaggaagaggctaagagggatggggctgttcttcttggagtcatgggcgggagaaac
agtgagggccaggattacagtggcgatgagatgaatggtgtaattttagttggtattcca
tatgcaaggccaactccaaaagttcaggcccagataaggtactttgaaaacaaattcccc
agaaagggaaggtattatggatatgttttaccagctcacaagaaactcgttcaggccgca
ggtagagttcatagaagtgaggaagagaagggtgcagttgtagtgttggattaccgttta
ttgtggagcaacgttagaaaagatttaccagattggatgaaagagacaataaaacctgtg
actttggcttcaatgaagcggcatcttatagatttttatagaggagaaaaaattaaagtg
gaaaaagattaa |
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