Thermococcus sibiricus: TSIB_1374
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Entry
TSIB_1374 CDS
T00928
Name
(GenBank) Probable archaeal transcription factor, related to transcription factor TFIIE, alpha subunit
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
tsi
Thermococcus sibiricus
Pathway
tsi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
TSIB_1374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsi03021
]
TSIB_1374
Transcription machinery [BR:
tsi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
TSIB_1374
Prokaryotic type
Archaeal type
TFE
TSIB_1374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Rad50_zn_hook
DUF7342
Prefoldin_2
Zn_Ribbon_TF
TrmB
Sigma70_r3
POLR3C_WHD
HTH_9
Phage_rep_org_N
HTH_Crp_2
HTH_24
Ribosomal_S13
Mut7-C
COQ7
Motif
Other DBs
NCBI-ProteinID:
ACS90425
UniProt:
C6A480
LinkDB
All DBs
Position
1230829..1231359
Genome browser
AA seq
176 aa
AA seq
DB search
MEGLTMARRKNKELLKFVEEIGGEEAKEVIKALEKKVEATDEELAEITGIRVNTVRKILY
SLYDNQLAEFRRTRDKDTGWYYYYWHLETKRLSDIIRSKKMQELKKLKEALEEETKEIYY
HCGTPSHPRLTFDEAMEYEFRCPLCGEMLMQYDNSEVVKELQERIKKLEKELGIKA
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
ttggagggtttaacaatggcaagaagaaaaaacaaggaactcctaaagttcgtggaggaa
attggaggggaagaagctaaagaagtaattaaagccctagagaagaaagtcgaagctact
gatgaagagctcgcagagataacggggataagagtaaacacagtacgtaaaattttgtat
tccctctatgataatcagttggcagagtttaggagaactagagacaaggatacaggatgg
tattactattactggcatctcgaaacaaaaaggttatcagatataataagaagcaaaaaa
atgcaagagctaaagaaactcaaagaagcccttgaagaggaaactaaagaaatctactat
cattgtggaactccaagtcatccgaggttgacttttgatgaggccatggaatatgaattc
agatgtcccttatgtggagaaatgcttatgcaatatgataacagcgaagttgtgaaagaa
cttcaagaaagaataaagaaacttgaaaaagaactcggaattaaagcttga
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