Thermococcus sibiricus: TSIB_1927
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Entry
TSIB_1927 CDS
T00928
Name
(GenBank) Peptide chain release factor subunit 1
KO
K03265
peptide chain release factor subunit 1
Organism
tsi
Thermococcus sibiricus
Pathway
tsi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
TSIB_1927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsi03019
]
TSIB_1927
03012 Translation factors [BR:
tsi03012
]
TSIB_1927
Messenger RNA biogenesis [BR:
tsi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
TSIB_1927
Translation factors [BR:
tsi03012
]
Eukaryotic type
Release factors
TSIB_1927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
HypA
MCM6_C
zf-RRPl_C4
TssR_VWA
Clr5
Motif
Other DBs
NCBI-ProteinID:
ACS90976
UniProt:
C5ZZZ5
LinkDB
All DBs
Position
complement(1730449..1731696)
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AA seq
415 aa
AA seq
DB search
MSHKSAEMYELKKKVEELKKIRGRATELVSLYIPADYDLNKVMQQLREEYGTAQNIKSKT
TRKNVLGALERAMQHLKLYRQTPETGLALFVGNVSEQEGVSDIRVFAIVPPEPLNVRLYR
CDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGILRGKKIEVIEDLTSNVPGKTRAGGQS
ARRYERIREQEAHEFMKRIGEHASSVFLPLLEKDELKGIIIGGPGPTKEEFVEGEYLHHE
LRKRILGVVDISYHGEYGLRELVEKASDILREHEAVKERKLVQQFFKHLVKDTGLITYGE
KEVRKALELGAVDILLLSEGYDRVRVKALCNNCGWEELKTMTEAEFELYKKNLKACPKCN
SQNISVEKWDVAEELIKIAEEGGAEVEIISLDTEEGQQFYKAFGGIAAILRYKLQ
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacaagtctgctgaaatgtatgagcttaaaaagaaggttgaggagcttaaaaag
attcgaggtcgagcaactgagctagtttccctctatattcccgcagattatgatttgaat
aaagtcatgcagcagcttagggaagaatatggaacagcccagaacatcaaatcgaagacc
actcgaaaaaacgttcttggggccttggaaagggccatgcagcaccttaaactttacaga
caaactccagagactggtttagctctttttgttggtaatgtgagtgaacaggaaggggtt
tctgatattagggtatttgccattgttccaccggaacccttaaacgtgaggctttatcga
tgtgaccagacttttgttacggaacctcttgaggaaatgttgagagttaaggatgcctat
ggtttaataacggttgagaagaacgaggccacaataggaattcttagagggaagaaaata
gaggtcattgaagatctaacttctaatgtgccaggaaagacaagggccggtggccagtca
gctcgaaggtatgagagaattagagaacaagaggctcatgaatttatgaaaagaattggt
gaacacgcaagcagtgtattcctccctctcttggaaaaagacgaacttaaagggattatt
attgggggtcctggccctacaaaggaggagttcgttgagggagagtatttgcaccatgaa
cttaggaaaaggattctgggtgttgtggacataagttaccacggggaatatggccttaga
gagcttgtagaaaaagcaagtgatatcttaagagaacatgaggccgttaaggagagaaaa
cttgttcagcagtttttcaagcacctagttaaggatactggccttataacttatggtgaa
aaggaagtgaggaaggccctcgaacttggagccgtggacatccttctcctgagtgaaggt
tatgatagagttagagtgaaagccttatgtaataactgtggctgggaagagctcaagaca
atgactgaggctgagtttgaactatataaaaagaacctcaaggcatgtcccaagtgcaac
agccagaatataagcgttgaaaaatgggatgtggcagaagagctcataaaaattgcagaa
gaaggcggggctgaggttgagataatctcccttgatactgaggaaggtcagcaattctac
aaggcttttggtgggatagctgccattctaaggtacaagctccagtga
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