Tenacibaculum singaporense: D6T69_00430
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Entry
D6T69_00430 CDS
T09846
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig02020
Two-component system
tsig02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D6T69_00430 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D6T69_00430 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsig03021
]
D6T69_00430 (rpoN)
Transcription machinery [BR:
tsig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D6T69_00430 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
SMC_ScpB
PIN_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AZJ34071
UniProt:
A0A3S8R2D9
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All DBs
Position
97628..99091
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AA seq
487 aa
AA seq
DB search
MLKQSLHQKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKDEPENFEDTL
ANDVDYDDSGNEKIDAEDINIDEYLSDDEYPSYKTQTNNYSSDDEDKQVPYAAGTSFHQS
LKNQLNTFRIDEEERAIAEFLVGSIDDSGYIRRDIIDLVDDLAFTQNIFTTEEKVQNVLI
NVVQKLDPTGVGALNLKECLIIQLKAKSENESRALAIRILEEAFDHFVKKHYKKLLEKFN
ISEEQLKEVISEISKLNPKPGSSYAGNNKIAEQIVPDFSIKIIDGNLDLTLNARNAPELH
VSREYNNMLKGYQDSKEKTKSQKDAVLFIKQKLDAAKWFIDAIKQRQQTLLVTMNAIMHR
QEEYFLTGDERKLKPMILKDIADEIGMDVSTVSRVASSKYVSTPYGTKLIKEFFSESMKN
DQGEDVSTREIKKILETVITEEDKRKPLTDEKLSKILKEKGYPIARRTVAKYREQLDIPV
ARLRKEI
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaaagtttacatcaaaaattacttcaaaaattatctccacaacaaatacag
ttgatgaagttaattcaattgcctacgcaagcttttgaagagcgtttgaaacaagaaatt
gaagaaaatcccgcattagatactggtaaagacgaacctgaaaattttgaggatacttta
gccaatgatgttgattatgacgattcgggcaatgaaaaaatagatgctgaagatataaac
attgatgagtatttaagtgacgatgaataccctagttataaaacgcaaactaataactat
tcttcagatgatgaagataaacaagttccttatgcggctggtactagctttcatcaatct
ttaaaaaatcaattaaatacatttagaattgatgaagaagaaagggccattgctgaattt
ttagtgggcagtattgatgatagcggttatatacgtagagatattatagatctagttgac
gacttagcttttacccaaaatatttttactactgaggaaaaagtacaaaatgttttaata
aatgttgttcaaaaattagaccctactggtgtaggtgctttaaatttaaaagagtgttta
attattcaattaaaagctaaatctgaaaatgaaagtagagcattagcaataagaatttta
gaagaagcttttgatcattttgtgaaaaaacactacaagaaacttctagaaaaattcaat
atttctgaagaacaattaaaagaggttattagcgaaataagcaaactaaacccaaaacct
ggaagttcatacgctggaaataataaaatagcagaacaaatagttcctgatttctcaatt
aaaattattgatgggaacttagatttaactttaaatgctcgtaacgctccagaattgcat
gtttctagagaatacaacaatatgttaaaagggtatcaagactctaaagagaaaactaaa
tctcaaaaagatgctgtactctttataaagcaaaaattagatgctgcaaaatggtttatt
gatgctataaaacagcgtcagcagacccttttagtaacaatgaatgcgattatgcatcgt
caagaagaatattttttaacaggtgatgagcgtaagttaaaacccatgattttaaaagat
attgctgacgaaattggtatggatgtatcaactgtttctcgtgtcgctagcagcaaatat
gtttctactccctatggtacaaaattaattaaggagttcttttctgaatcgatgaaaaac
gaccaaggagaagatgtttcaactagagaaattaagaaaattttagaaacagtaattaca
gaggaagacaaacgaaaacctcttaccgatgaaaaattatctaaaattttaaaagaaaaa
ggataccccatcgctagaagaacagttgctaagtatcgtgaacaattagacattcctgtc
gcaagattacgtaaagaaatttaa
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