KEGG   Tenacibaculum singaporense: D6T69_00430
Entry
D6T69_00430       CDS       T09846                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
tsig  Tenacibaculum singaporense
Pathway
tsig02020  Two-component system
tsig02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tsig00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    D6T69_00430 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    D6T69_00430 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsig03021]
    D6T69_00430 (rpoN)
Transcription machinery [BR:tsig03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D6T69_00430 (rpoN)
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID LacI SMC_ScpB PIN_2 HTH_IclR
Other DBs
NCBI-ProteinID: AZJ34071
UniProt: A0A3S8R2D9
LinkDB
Position
97628..99091
AA seq 487 aa
MLKQSLHQKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKDEPENFEDTL
ANDVDYDDSGNEKIDAEDINIDEYLSDDEYPSYKTQTNNYSSDDEDKQVPYAAGTSFHQS
LKNQLNTFRIDEEERAIAEFLVGSIDDSGYIRRDIIDLVDDLAFTQNIFTTEEKVQNVLI
NVVQKLDPTGVGALNLKECLIIQLKAKSENESRALAIRILEEAFDHFVKKHYKKLLEKFN
ISEEQLKEVISEISKLNPKPGSSYAGNNKIAEQIVPDFSIKIIDGNLDLTLNARNAPELH
VSREYNNMLKGYQDSKEKTKSQKDAVLFIKQKLDAAKWFIDAIKQRQQTLLVTMNAIMHR
QEEYFLTGDERKLKPMILKDIADEIGMDVSTVSRVASSKYVSTPYGTKLIKEFFSESMKN
DQGEDVSTREIKKILETVITEEDKRKPLTDEKLSKILKEKGYPIARRTVAKYREQLDIPV
ARLRKEI
NT seq 1464 nt   +upstreamnt  +downstreamnt
atgctaaaacaaagtttacatcaaaaattacttcaaaaattatctccacaacaaatacag
ttgatgaagttaattcaattgcctacgcaagcttttgaagagcgtttgaaacaagaaatt
gaagaaaatcccgcattagatactggtaaagacgaacctgaaaattttgaggatacttta
gccaatgatgttgattatgacgattcgggcaatgaaaaaatagatgctgaagatataaac
attgatgagtatttaagtgacgatgaataccctagttataaaacgcaaactaataactat
tcttcagatgatgaagataaacaagttccttatgcggctggtactagctttcatcaatct
ttaaaaaatcaattaaatacatttagaattgatgaagaagaaagggccattgctgaattt
ttagtgggcagtattgatgatagcggttatatacgtagagatattatagatctagttgac
gacttagcttttacccaaaatatttttactactgaggaaaaagtacaaaatgttttaata
aatgttgttcaaaaattagaccctactggtgtaggtgctttaaatttaaaagagtgttta
attattcaattaaaagctaaatctgaaaatgaaagtagagcattagcaataagaatttta
gaagaagcttttgatcattttgtgaaaaaacactacaagaaacttctagaaaaattcaat
atttctgaagaacaattaaaagaggttattagcgaaataagcaaactaaacccaaaacct
ggaagttcatacgctggaaataataaaatagcagaacaaatagttcctgatttctcaatt
aaaattattgatgggaacttagatttaactttaaatgctcgtaacgctccagaattgcat
gtttctagagaatacaacaatatgttaaaagggtatcaagactctaaagagaaaactaaa
tctcaaaaagatgctgtactctttataaagcaaaaattagatgctgcaaaatggtttatt
gatgctataaaacagcgtcagcagacccttttagtaacaatgaatgcgattatgcatcgt
caagaagaatattttttaacaggtgatgagcgtaagttaaaacccatgattttaaaagat
attgctgacgaaattggtatggatgtatcaactgtttctcgtgtcgctagcagcaaatat
gtttctactccctatggtacaaaattaattaaggagttcttttctgaatcgatgaaaaac
gaccaaggagaagatgtttcaactagagaaattaagaaaattttagaaacagtaattaca
gaggaagacaaacgaaaacctcttaccgatgaaaaattatctaaaattttaaaagaaaaa
ggataccccatcgctagaagaacagttgctaagtatcgtgaacaattagacattcctgtc
gcaagattacgtaaagaaatttaa

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