KEGG   Tenacibaculum singaporense: D6T69_06335
Entry
D6T69_06335       CDS       T09846                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
tsig  Tenacibaculum singaporense
Pathway
tsig03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tsig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    D6T69_06335 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsig03400]
    D6T69_06335 (uvrA)
DNA repair and recombination proteins [BR:tsig03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D6T69_06335 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      D6T69_06335 (uvrA)
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 nSTAND3 AAA_33 AAA_22 DnaJ_CXXCXGXG AAA_21 Viral_helicase1 T2SSE AAA_18 cobW AAA_24 AAA_25 MeaB DUF1924 AAA_23 His_biosynth AAA_15
Other DBs
NCBI-ProteinID: AZJ35160
UniProt: A0A3S8R5V3
LinkDB
Position
complement(1370926..1373751)
AA seq 941 aa
MKEQEYIEVYGARAHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFSRAAD
AYSYNTGEKMVSYSDEQIRKLILKDFDGKRIAILAPLIKSRKGHYRELFEQISKQGFVRV
RVDGEIREIEKGMKLDRYKTHDIEVVIDRLVVNDAAEKRLEETIRTALYTGDNILMVIDV
DDEKPRYFSRELMCPTTGIAYPNPEPNTFSFNSPKGACSHCNGLGITNEINHQKVIPDDS
ISIKNGGIAPLGEQKNSSIFKQLQTIAERYNFKLTDPIKSIPKEAMEIILHGGKEKFEIQ
SKTAGVTRNYEIDFEGIIAFIENQYKNSESTSIKRWAKGFMDEVTCSVCDGKRLKKEALH
FKITDKNISDLAQMDVLELASWFQKVDKKLSEKQLTIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLIKLRDVG
NSVLVVEHDEDMIKNADFVLDIGPGAGRHGGEIVSEGNFDDLKSHDTLTADYLSRRKEIE
VPKKRRDGNGKTISLKGASGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRAVKKPMPFKKIEGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFSEIRSLFAKTPEA
SIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDILEMTINEATVFFEHIPKIYRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
SELSKRDTGNTFYILDEPTTGLHFEDIRVLMDVLNKLADKGNTVLIIEHNLDVIKLADYI
IDIGIEGGKKGGKVLTFGTPEEVSEHKKSYTAKFLKKELKK
NT seq 2826 nt   +upstreamnt  +downstreamnt
ttgaaagaacaagaatacatagaagtttacggagcccgagctcataatttaaagaatatt
gatgttaaaattcctcgtgaaaagctagttgtaattactggtttaagcgggagtggaaaa
tcttctttagctttcgacaccatttatgctgaaggacaacgtcgttatattgaaactttc
tcagcttatgcacgtcagtttttaggcgggttagaaagacctgatgttgataaaatagac
ggactttctcctgtaatttctattgaacaaaaaacaacaaacaaaagtcctcgttctacc
gtaggaactattactgaaatttacgattttcttcgtttattattttctcgtgcagcagat
gcttactcatacaatacaggtgaaaaaatggtaagttattctgacgaacaaatcagaaaa
ttaattttaaaggattttgacggaaaacgcattgccattcttgcaccattaattaaatcg
agaaaagggcattatcgcgaattatttgaacaaatttctaaacaaggttttgttcgtgtt
cgtgtggatggagaaattagagagattgaaaagggcatgaagctcgatcgttacaaaaca
catgatatcgaagtggttatcgatcgattagttgtaaatgatgctgccgaaaaacgccta
gaagagactattagaactgcattatacacgggtgataatattttaatggtaatagatgtt
gatgatgaaaagcctcgttattttagtcgtgaactgatgtgtccaactacaggaattgcc
taccctaaccccgaaccaaacactttttcgttcaactcaccaaaaggagcttgttcacac
tgcaacggactaggaattaccaacgagataaaccatcaaaaagtaattccagacgatagc
atttctattaaaaacggaggaattgcacccttaggtgaacaaaaaaatagttcgattttt
aaacagcttcaaactattgctgagcgttataactttaagttaaccgaccctataaaaagt
attcctaaagaagctatggagattattcttcatggaggaaaagaaaagtttgaaattcaa
tcaaaaactgctggagttaccagaaattatgagattgattttgaaggtatcattgccttt
attgagaatcaatataaaaactcagaaagcacttccatcaaacgttgggcaaaaggtttt
atggatgaagttacttgttcggtttgtgatggaaagcgtttaaaaaaagaagcacttcat
tttaaaatcaccgataaaaacattagtgatttagcccaaatggatgtgttagagttagct
agttggtttcaaaaagttgataaaaaactatctgaaaaacaattaactattgcttctgaa
attttaaaagaaatccgcacacgcattcagtttttattggatgttgggttagattattta
acattagacagaacttcaaaatctctttctggaggagaagcccaacgcattagacttgca
acacaaataggttcacaacttgtaggtgttttatatattttagatgaacctagtattggt
ttacatcaacgtgataatcaaaaattaattgactctttaattaaacttcgtgatgttgga
aattctgttttagtggttgagcatgatgaggatatgattaagaatgctgattttgtgtta
gatattggtccaggtgcaggtcgtcatggaggagaaattgttagcgaaggcaactttgac
gatttaaaaagtcacgatactctcactgctgactatttatcgagaagaaaagaaattgag
gttcctaaaaagcgtcgtgacggaaacggaaaaacaatctcattaaaaggcgcttctgga
aacaacttaaaaaatgtttccgtggaatttcctttaggaaagatgatttgtgtcacaggt
gtttctggtagtggaaaatctactttaatcaacgaaaccctctaccctatcctaaatgca
cacatttatcgagcggttaaaaaaccaatgcctttcaaaaaaattgaaggtttagaacat
attgataaagtaattgatattgatcaatctcctattggtagaactccacgttcaaaccca
gctacctatactggagtgtttagtgaaatacgtagtttatttgctaaaactccagaagct
tctattagagggtataaaccaggtcgttttagttttaatgtaaaaggtggacgttgtgaa
acctgtcaaggtggtggtgttcgtgtaatagaaatgaattttttaccagatgttcatgta
gaatgtgaaacttgccaaggaaaacgttttaaccgagaaactttagaaattcgttataaa
ggaaagtcgatttctgatattttagaaatgacaatcaacgaagctacagtattttttgag
catattcctaagatctatagaaaattaaaaacaattaaagatgttggtttagggtatatt
acactcggacaacagtctactactctctctggtggagaagcacaacgtattaaattagca
tcagagttatcaaaaagagatactggaaataccttttatatattagacgaaccaacaact
ggacttcattttgaagatattcgtgtgttgatggatgttttaaataagttagcagataaa
ggaaacactgttttaattattgaacacaacttggatgtaattaaactcgccgattatatt
attgatataggtatagaaggtggtaaaaaaggcggtaaagtattaacatttggaactcct
gaagaagtttctgaacacaaaaaaagctacacagcaaaattcttaaaaaaagagttaaaa
aagtga

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