Tenacibaculum singaporense: D6T69_06335
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Entry
D6T69_06335 CDS
T09846
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D6T69_06335 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsig03400
]
D6T69_06335 (uvrA)
DNA repair and recombination proteins [BR:
tsig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D6T69_06335 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D6T69_06335 (uvrA)
BRITE hierarchy
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
nSTAND3
AAA_33
AAA_22
DnaJ_CXXCXGXG
AAA_21
Viral_helicase1
T2SSE
AAA_18
cobW
AAA_24
AAA_25
MeaB
DUF1924
AAA_23
His_biosynth
AAA_15
Motif
Other DBs
NCBI-ProteinID:
AZJ35160
UniProt:
A0A3S8R5V3
LinkDB
All DBs
Position
complement(1370926..1373751)
Genome browser
AA seq
941 aa
AA seq
DB search
MKEQEYIEVYGARAHNLKNIDVKIPREKLVVITGLSGSGKSSLAFDTIYAEGQRRYIETF
SAYARQFLGGLERPDVDKIDGLSPVISIEQKTTNKSPRSTVGTITEIYDFLRLLFSRAAD
AYSYNTGEKMVSYSDEQIRKLILKDFDGKRIAILAPLIKSRKGHYRELFEQISKQGFVRV
RVDGEIREIEKGMKLDRYKTHDIEVVIDRLVVNDAAEKRLEETIRTALYTGDNILMVIDV
DDEKPRYFSRELMCPTTGIAYPNPEPNTFSFNSPKGACSHCNGLGITNEINHQKVIPDDS
ISIKNGGIAPLGEQKNSSIFKQLQTIAERYNFKLTDPIKSIPKEAMEIILHGGKEKFEIQ
SKTAGVTRNYEIDFEGIIAFIENQYKNSESTSIKRWAKGFMDEVTCSVCDGKRLKKEALH
FKITDKNISDLAQMDVLELASWFQKVDKKLSEKQLTIASEILKEIRTRIQFLLDVGLDYL
TLDRTSKSLSGGEAQRIRLATQIGSQLVGVLYILDEPSIGLHQRDNQKLIDSLIKLRDVG
NSVLVVEHDEDMIKNADFVLDIGPGAGRHGGEIVSEGNFDDLKSHDTLTADYLSRRKEIE
VPKKRRDGNGKTISLKGASGNNLKNVSVEFPLGKMICVTGVSGSGKSTLINETLYPILNA
HIYRAVKKPMPFKKIEGLEHIDKVIDIDQSPIGRTPRSNPATYTGVFSEIRSLFAKTPEA
SIRGYKPGRFSFNVKGGRCETCQGGGVRVIEMNFLPDVHVECETCQGKRFNRETLEIRYK
GKSISDILEMTINEATVFFEHIPKIYRKLKTIKDVGLGYITLGQQSTTLSGGEAQRIKLA
SELSKRDTGNTFYILDEPTTGLHFEDIRVLMDVLNKLADKGNTVLIIEHNLDVIKLADYI
IDIGIEGGKKGGKVLTFGTPEEVSEHKKSYTAKFLKKELKK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaacaagaatacatagaagtttacggagcccgagctcataatttaaagaatatt
gatgttaaaattcctcgtgaaaagctagttgtaattactggtttaagcgggagtggaaaa
tcttctttagctttcgacaccatttatgctgaaggacaacgtcgttatattgaaactttc
tcagcttatgcacgtcagtttttaggcgggttagaaagacctgatgttgataaaatagac
ggactttctcctgtaatttctattgaacaaaaaacaacaaacaaaagtcctcgttctacc
gtaggaactattactgaaatttacgattttcttcgtttattattttctcgtgcagcagat
gcttactcatacaatacaggtgaaaaaatggtaagttattctgacgaacaaatcagaaaa
ttaattttaaaggattttgacggaaaacgcattgccattcttgcaccattaattaaatcg
agaaaagggcattatcgcgaattatttgaacaaatttctaaacaaggttttgttcgtgtt
cgtgtggatggagaaattagagagattgaaaagggcatgaagctcgatcgttacaaaaca
catgatatcgaagtggttatcgatcgattagttgtaaatgatgctgccgaaaaacgccta
gaagagactattagaactgcattatacacgggtgataatattttaatggtaatagatgtt
gatgatgaaaagcctcgttattttagtcgtgaactgatgtgtccaactacaggaattgcc
taccctaaccccgaaccaaacactttttcgttcaactcaccaaaaggagcttgttcacac
tgcaacggactaggaattaccaacgagataaaccatcaaaaagtaattccagacgatagc
atttctattaaaaacggaggaattgcacccttaggtgaacaaaaaaatagttcgattttt
aaacagcttcaaactattgctgagcgttataactttaagttaaccgaccctataaaaagt
attcctaaagaagctatggagattattcttcatggaggaaaagaaaagtttgaaattcaa
tcaaaaactgctggagttaccagaaattatgagattgattttgaaggtatcattgccttt
attgagaatcaatataaaaactcagaaagcacttccatcaaacgttgggcaaaaggtttt
atggatgaagttacttgttcggtttgtgatggaaagcgtttaaaaaaagaagcacttcat
tttaaaatcaccgataaaaacattagtgatttagcccaaatggatgtgttagagttagct
agttggtttcaaaaagttgataaaaaactatctgaaaaacaattaactattgcttctgaa
attttaaaagaaatccgcacacgcattcagtttttattggatgttgggttagattattta
acattagacagaacttcaaaatctctttctggaggagaagcccaacgcattagacttgca
acacaaataggttcacaacttgtaggtgttttatatattttagatgaacctagtattggt
ttacatcaacgtgataatcaaaaattaattgactctttaattaaacttcgtgatgttgga
aattctgttttagtggttgagcatgatgaggatatgattaagaatgctgattttgtgtta
gatattggtccaggtgcaggtcgtcatggaggagaaattgttagcgaaggcaactttgac
gatttaaaaagtcacgatactctcactgctgactatttatcgagaagaaaagaaattgag
gttcctaaaaagcgtcgtgacggaaacggaaaaacaatctcattaaaaggcgcttctgga
aacaacttaaaaaatgtttccgtggaatttcctttaggaaagatgatttgtgtcacaggt
gtttctggtagtggaaaatctactttaatcaacgaaaccctctaccctatcctaaatgca
cacatttatcgagcggttaaaaaaccaatgcctttcaaaaaaattgaaggtttagaacat
attgataaagtaattgatattgatcaatctcctattggtagaactccacgttcaaaccca
gctacctatactggagtgtttagtgaaatacgtagtttatttgctaaaactccagaagct
tctattagagggtataaaccaggtcgttttagttttaatgtaaaaggtggacgttgtgaa
acctgtcaaggtggtggtgttcgtgtaatagaaatgaattttttaccagatgttcatgta
gaatgtgaaacttgccaaggaaaacgttttaaccgagaaactttagaaattcgttataaa
ggaaagtcgatttctgatattttagaaatgacaatcaacgaagctacagtattttttgag
catattcctaagatctatagaaaattaaaaacaattaaagatgttggtttagggtatatt
acactcggacaacagtctactactctctctggtggagaagcacaacgtattaaattagca
tcagagttatcaaaaagagatactggaaataccttttatatattagacgaaccaacaact
ggacttcattttgaagatattcgtgtgttgatggatgttttaaataagttagcagataaa
ggaaacactgttttaattattgaacacaacttggatgtaattaaactcgccgattatatt
attgatataggtatagaaggtggtaaaaaaggcggtaaagtattaacatttggaactcct
gaagaagtttctgaacacaaaaaaagctacacagcaaaattcttaaaaaaagagttaaaa
aagtga
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