Tenacibaculum singaporense: D6T69_07945
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Entry
D6T69_07945 CDS
T09846
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
tsig
Tenacibaculum singaporense
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsig03009
]
D6T69_07945 (rlmD)
Enzymes [BR:
tsig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
D6T69_07945 (rlmD)
Ribosome biogenesis [BR:
tsig03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
D6T69_07945 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
MTS
Methyltransf_25
PrmA
TRM5-TYW2_MTfase
Methyltransf_32
Cons_hypoth95
Methyltransf_12
Methyltransf_15
FtsJ
N6_N4_Mtase
Methyltransf_11
UPF0020
Methyltransf_ANTKMT
DUF8450
Methyltransf_4
Ubie_methyltran
Methyltransf_18
mRNA_G-N7_MeTrfase
SpoVT_C
PCMT
DUF5662
Motif
Other DBs
NCBI-ProteinID:
AZJ35457
UniProt:
A0A3S8R6S9
LinkDB
All DBs
Position
complement(1788873..1790324)
Genome browser
AA seq
483 aa
AA seq
DB search
MPRRERNKFVKRGQIIEILIEDYAFGGKGIGRIRSEEGVFVVFVPNTLPGQLVKARVDKS
KKKYAECKLIDVLKHSNDEVTIPYQDIPGAPYIQLPIDLQHKYKQESTLSLFKRIGKVEN
IEDLFDEFIASPNVFHYRNKMEYGFSAIGYDRENKTDVDEFTLGFKRRGVWWMGDNLEKD
SGLFDKQVEDNIKNIREYCKKTGLAPWHGPKKEGFFRYFVVRKSYKTNKLLFNLVTTSHD
LSKFDLKEFANYLVELFGDRVAGLLHTINDETGDRTIATSGSVKLVYGKDKIVEELLGLN
FEISMKSFFQTNPKSAEKLYTKVVDYALENKDAIDNTVVMDLFCGTGTIGQIIASKSNNT
KIVGVDIVASAIEDAKKNAERNNIEGLQFYAADVGKFLNEHPQYKNKIRTIILDPARAGI
APKTLKKIINLNADRMVYVSCNPATQARDTEELMKNGYQLKKISLVDQFPHTSHIETVVL
FEK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaagagagcgaaataaatttgtaaaaagaggacaaatcattgaaattttaatt
gaagattatgccttcggcggaaaaggaattggaagaatacgttcagaagaaggtgttttt
gtagtttttgttcctaacactttaccaggacagttagtaaaagcacgtgtagacaagtca
aagaaaaagtatgcagaatgtaaattaatagatgttttaaaacattctaatgacgaagta
actattccttatcaagatattcctggagcaccttacattcaattgcctatagatttacaa
cacaaatacaagcaagaaagtactttatctttatttaagcgtattggtaaagttgaaaat
attgaagatttatttgatgaatttatcgcttctcctaatgtattccactatagaaataaa
atggaatatggtttttctgccattggttacgaccgtgaaaacaaaaccgatgtagatgaa
tttactttaggttttaaacgtcgcggtgtttggtggatgggtgataacctagaaaaagat
tctggtttatttgacaaacaagttgaagataacatcaaaaacattagagaatattgtaaa
aaaactggtttagcgccttggcacgggcctaaaaaagaaggtttctttaggtattttgtg
gtaagaaaatcatacaaaaccaacaaattattattcaacttagtaaccacttctcacgat
ttatcaaaatttgatttaaaagagtttgctaactatttagtagagttatttggcgataga
gttgctggtttattacatactattaatgacgaaactggcgacagaaccatagctacttca
ggaagtgtaaaattagtatacggaaaagataaaattgtagaagaattattaggtttaaat
tttgaaatcagcatgaaaagcttttttcaaaccaatcctaaatctgccgaaaaactatat
accaaagtagttgattatgcgttagaaaacaaagatgcaattgacaataccgtagtgatg
gacttattctgtggaacaggaactattggacaaattattgcttcaaaatcgaataacact
aaaattgttggtgtagatattgtagcttctgctattgaagacgctaagaaaaatgcagaa
cgtaacaatattgaaggtttacaattttatgcagctgatgtaggaaagttcttaaacgaa
cacccacaatataaaaataagataagaaccattattttagatccagctcgtgcgggtatt
gcaccaaaaacgcttaagaaaatcataaacttaaatgcagatagaatggtttatgtatct
tgtaaccctgcaacacaagctcgtgataccgaagagttgatgaaaaacggatatcaatta
aaaaagattagtttagtagatcaatttccacatacatcacacatagaaacggtggtttta
tttgaaaaataa
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