Tenacibaculum singaporense: D6T69_09505
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Entry
D6T69_09505 CDS
T09846
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D6T69_09505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsig03019
]
D6T69_09505
03400 DNA repair and recombination proteins [BR:
tsig03400
]
D6T69_09505
Enzymes [BR:
tsig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D6T69_09505
Messenger RNA biogenesis [BR:
tsig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D6T69_09505
DNA repair and recombination proteins [BR:
tsig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D6T69_09505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
HHH
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AZJ35743
UniProt:
A0A3Q8RQW2
LinkDB
All DBs
Position
2138800..2140995
Genome browser
AA seq
731 aa
AA seq
DB search
MNKEQTDLYGSLKKIFGFNQFKGLQEDVVNSVLENKNTFVIMPTGGGKSLCYQLPALMKE
GTAIVVSPLIALMKNQVDAIRGISENHGIAHVLNSSLNKSEIAQVKSDIESGITKLLYVA
PESLIKEEYAEFLRRQKISFVAIDEAHCISEWGHDFRPEYRNLRNIIKQIDNVPIIGLTA
TATEKVQEDILKTLGMSDANVFKASFNRSNLFYEVRPKTKDVEKDIIRFIKQRIGKSGII
YCLSRKKVEEIAQILQVNGINAVPYHAGLDAKTRVKHQDMFLMEDCDVVVATIAFGMGID
KPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGYCLTFYSYKDIEKLEKFMANKPVAEQE
VGHALLQEVVGYAETSMNRRKYLLHYFGEEFDEVNGEGADMDDNMRNPKKKHEAKDEVVT
LLSVIRDTSEMYKPKEIVNTIIGKENALLKSHKTNVQPFFGIGKAKDNHYWMALIRQVLV
ADLIKKEIEQYGVLKLTKEGKEFIKNPSSFMMTENHVYKTADDGTIITNEKSAGGVDDKL
VVMLKDLRKKVGKRLGVPPFAVFQDPSLDDMALKYPVTLDELAKVHGVGEGKAKKYGKDF
VALISKYVEDNDIMRPDDLIVKSTGVNSGLKLYIIQNTDRKLPLEDIAKSKGLEMSELIK
EMEAIVFSGTKLNIDYAVDDLLDEDQQEEIHDYFMEAETDKIQEALDEFDGDYDDDELRL
MRIKFTSEIAN
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagagcagacggatttatatggatcattaaaaaaaatcttcggatttaaccag
tttaaagggctacaagaagatgtagttaacagtgtgttagaaaataaaaacacatttgtt
attatgccgactggtggtggtaaatcgctatgttatcaattacctgccttaatgaaggaa
ggtacagcaattgtggtatctccattaattgctttaatgaaaaatcaagtagatgccatt
agagggatttctgaaaatcatggaatagcccatgtattaaattcttcgttgaacaaatcg
gagattgcacaagtaaaatcagatattgaatcgggaattaccaagttattgtacgtagct
cctgaatctttaattaaagaagagtacgctgagtttttaagaagacaaaaaatatcattt
gtagctattgatgaagcacactgtatatctgagtgggggcatgattttagacctgagtat
agaaatctgagaaatattattaaacagattgataatgtaccaattattggtttaactgca
accgcaacagagaaagtacaagaagatattcttaaaactcttggaatgtcagatgcaaat
gtgtttaaagcatctttcaacagatcaaatttattctacgaagttaggcctaagactaaa
gatgtagaaaaagacattattcgctttataaaacaacgaataggaaaatcaggtattatt
tactgcttgagtcgtaaaaaagtggaagaaatagcgcaaattttacaagtcaacggaatt
aatgctgttccttaccatgcaggtttagacgcaaaaacacgtgtaaagcatcaagacatg
ttcttaatggaagattgtgatgttgtagtagctactattgcttttggtatgggaattgac
aaaccagatgttcgttttgtaatacaccacgacattcctaaaagtttagagagttattat
caagaaactggtagagcaggacgtgatggaggagaaggttattgcctaactttctattca
tataaagatatagaaaagcttgagaagtttatggcgaacaagcctgttgctgagcaagaa
gttggacatgctctattacaagaagttgtagggtacgctgaaacatcaatgaacaggcgt
aaatatttactgcattattttggagaagaatttgatgaagtaaatggagaaggtgctgat
atggacgataatatgcgaaatcctaagaagaagcacgaagctaaagatgaagtagtaacc
ttattatctgttattagagatactagtgaaatgtataaaccaaaagaaattgtaaacaca
attattggtaaagaaaatgcattgttaaagtctcataaaacaaatgttcagccttttttt
ggtattggtaaagctaaagacaatcattattggatggctttaatccgtcaagttttagtt
gcggatttaatcaagaaagaaatagaacagtatggagttttaaaactaacaaaagaaggt
aaagagtttataaaaaatccatcatcatttatgatgacagaaaatcacgtatataaaaca
gcagatgatggtactattattaccaatgaaaaatcagcaggaggagtagatgataaattg
gtagtgatgctaaaagatttaagaaagaaagtaggaaaacgtttaggagttcctcctttt
gcggtttttcaagacccatctttagatgatatggcattgaaataccctgtaacattagat
gaacttgcaaaagttcatggtgttggtgaggggaaagccaaaaaatatggtaaagatttc
gttgcgcttatttcaaaatatgtggaagacaacgatattatgcgccctgatgatttaata
gttaaaagtactggagttaattctggattaaagttatacatcattcaaaatactgatagg
aaattgcctttagaagatattgctaagtctaaaggtttagaaatgtctgaattaataaag
gagatggaagctattgtattttctggaactaaacttaatattgattatgcagtagatgac
ttacttgatgaggatcagcaggaagaaattcatgattattttatggaagctgagacagat
aaaattcaagaagccttggatgagtttgatggagattatgatgatgatgaattacgatta
atgcgtattaaatttaccagtgaaatagctaactaa
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