Tenacibaculum singaporense: D6T69_10720
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Entry
D6T69_10720 CDS
T09846
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D6T69_10720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsig03019
]
D6T69_10720
03009 Ribosome biogenesis [BR:
tsig03009
]
D6T69_10720
Enzymes [BR:
tsig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D6T69_10720
Messenger RNA biogenesis [BR:
tsig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D6T69_10720
Ribosome biogenesis [BR:
tsig03009
]
Prokaryotic type
rRNA helicases
D6T69_10720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RecG_N
Helicase_RecD
Cas3-like_C_2
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
AZJ35970
UniProt:
A0A3Q8RTJ6
LinkDB
All DBs
Position
2405931..2407721
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AA seq
596 aa
AA seq
DB search
MSTFLDLGLQEPINKALTDLGYEKPTVIQEKAIPQIISSTEDLKAFAQTGTGKTAAFSLP
IIELADQTSTHTQAIILSPTRELAVQIGKNIEDFSKYLPNLKVATVYGGANIEEQIRKLK
KGVQIVVGTPGRTVDLIKRRALKLGNVQWLVLDEADEMLNMGFKDELDQVLEATPNTKQT
LLFSATFPREVEDIAKNYMTNPVEVTSGQKNQGSDNVSHEYYLVNEKTRYPALKRVADLN
PDIYGIVFCRTRRETQEVANNLIRDGYNADSLHGDLSQAQRDSVMEKFRKKNIQILVATD
VAARGLDVNNLTHVINHKLPDQIENYNHRSGRTGRAGNKGISIALVSKKEQGRLRPIERI
IKKQFVHTPIPSGKEICQNQLFHLIDKVHNTEVNTEQIEGFLPSIYEKLEDLSREELIQK
FVSLEFNTFLSYYENAPDLNNLSSRENSRGRSSSENMTRFFINLGRKDRLNPAKLIGLIN
DQNIGDKIEIGAIDILDTFSFFEIDKNFEKETLDAFTANDPDFNGRSVNIEITKNDRSGG
GRKSRRSGGGFNGKKRRSDKPTDSRKSFGRRRNENNSSRRSDNKPAAGFGRKRRRD
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttttagatttaggtttgcaagaacctatcaataaggcattaaccgattta
ggttatgaaaagccaacagtaattcaagaaaaagcaattccgcagataatttcttcaact
gaagatttaaaagcatttgcacaaacaggtacaggtaaaactgctgcctttagtttacct
attattgaacttgctgatcaaacaagcacacacacacaagcaattatattatctcctact
cgtgaactagcagtacaaataggaaaaaacattgaagatttttcaaagtatttacctaat
ttgaaagtagctactgtttatggtggggctaatattgaagagcaaataagaaaacttaaa
aaaggtgttcaaatagttgttggtactcctggtagaacagtagacttaattaaaagaaga
gctttaaagcttggtaatgtacaatggttagtacttgacgaagctgatgaaatgcttaac
atggggtttaaagatgaattagaccaagttttagaagctacaccaaataccaaacaaaca
ttattgttttctgctacttttcctagagaagtagaagatatagctaaaaactacatgacc
aatcctgtagaggttacatcagggcaaaaaaaccaaggttccgataacgttagtcatgag
tattatttagtaaacgaaaaaactcgttaccctgctttaaagagagtagctgatttaaac
cctgatatttacggaattgttttctgtagaacacgtagagaaacacaagaagtagctaat
aatcttattagagatggttataatgctgattctttacatggtgatttatcacaagctcaa
cgtgactctgtaatggagaagtttcgtaaaaagaatattcaaatattagtagctactgac
gtggctgctcgtggattagatgttaataatttaacgcacgttatcaatcataaattacca
gatcaaattgaaaactacaaccaccgtagtggtagaactggtagagctggtaataaggga
atttctattgctttagtaagcaaaaaagaacaaggtaggttacgtcctattgaacgtatt
ataaaaaaacaatttgttcacactcctattccatctggcaaggaaatatgtcaaaatcaa
ttgtttcatttaattgataaggttcataatactgaggtaaacacagaacaaattgaaggt
tttttaccaagtatttacgaaaaattagaagatttaagtcgtgaagagttaattcaaaag
tttgtttctttagagttcaacaccttcttatcttactacgaaaatgctcctgatttaaac
aacttatcttcaagagaaaattcaagaggacgttcttctagtgaaaacatgacccgtttc
tttatcaatttaggaagaaaagatcgtttaaacccagccaagttaattggtttaatcaac
gatcagaacattggtgataagattgaaattggtgctatagatatcttagatactttttct
ttctttgaaatcgataagaactttgaaaaagaaaccttagacgcttttactgctaatgat
ccagattttaatggacgatcagtgaatatcgaaattactaaaaacgaccgtagtggtggt
ggaagaaaatcacgtagaagtggtggtggatttaatggtaaaaaacgtagaagtgataag
cctactgatagcagaaaaagttttggtagaagacgtaacgaaaataactcttcaagaaga
agtgataacaagcctgctgcaggatttggtagaaagcgtagaagagattaa
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