Tenacibaculum singaporense: D6T69_14790
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Entry
D6T69_14790 CDS
T09846
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D6T69_14790 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsig03019
]
D6T69_14790 (recQ)
03400 DNA repair and recombination proteins [BR:
tsig03400
]
D6T69_14790 (recQ)
Enzymes [BR:
tsig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D6T69_14790 (recQ)
Messenger RNA biogenesis [BR:
tsig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D6T69_14790 (recQ)
DNA repair and recombination proteins [BR:
tsig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D6T69_14790 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
DHquinase_II
PSK_trans_fac
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AZJ37090
UniProt:
A0A3Q8RT57
LinkDB
All DBs
Position
complement(3267467..3269569)
Genome browser
AA seq
700 aa
AA seq
DB search
MQITEQELLEKLKVNFGYDSFRLEQQAIIENILAKKDTLVIMPTGGGKSICYQLPALFFE
GVTLVISPLIALMKDQVDSLRANGISATFFNSSQSTEEQQQVFDAIASKSIKLLYVAPES
LSLLQNVLNQSYISCIAVDEAHCISAWGHDFRPSYKQLAFLKKSLPEIPIVALTATADKA
TQQDILEQLAVPNATQFISSFNRENIALEVRPANDRVQQIIKFIQRRPNEAGIIYCLSRK
ATEQLASKLQQNNIDAKAYHAGLSFEERAKTQEAFIKDDCEVICATIAFGMGIDKSNVRW
VIHYNMPKNIEGYYQEIGRSGRDGLPAKALLFHSYADVIQLRQFIENTGNKEVQEAKLER
MKQFAEATVCRRKILLSYFGELIEENCGNCDVCKNPPQFFDGTVIAQKGLSAIYRLQGKE
AMGTVIDVLRGAKNATVLDRNYDKLKTYGVGNDISWRDWQHYLIQLTNQGYCQIAFHLHN
SLQLTEFSNKVLFEGEKVQLTTPVAFTKEVKTVTKEKKKKAVKDTLFERLRKLRYRIAQE
EDIAAYLVFNDATLKEIENERPQSDEEFLAISGVGQRKLEVYGAEFMEEIKTFLNEKKKT
KKDTTLETFKLYKEGFTVEGIAENRGLKPTTIFSHLSKLYLEGKDVSLDEFIEADTLALV
ANAKKVLKNETALKPYFEFLGEQVPYEKIRVGLTILRRKG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcagattacagaacaagaattgttagaaaaattaaaggtaaattttggatatgatagt
tttcgtttagagcaacaagctattatcgaaaatattttagcaaaaaaagatacgttggtt
attatgccaacaggaggaggaaagtctatttgttatcaattaccagccttgttttttgaa
ggtgttacgttggtgatttctccattaatagctttgatgaaagatcaagtagatagcttg
agagcaaatggaatttctgctactttttttaacagtagtcaatctacagaagagcagcaa
caagtatttgatgcgatagcttcaaaaagtataaaattattgtacgtcgcaccagaaagt
ttatcattactccaaaatgtgttaaatcaatcttatataagttgtattgctgttgatgag
gcgcactgtatttctgcttgggggcacgattttcgtccttcctacaagcaattagcattt
ttaaaaaagtcattacctgaaattccgattgtagcattaacagcaactgcagataaagct
acgcaacaagatattttagaacagttagctgtacctaatgctacacaatttataagttct
tttaacagagaaaatattgctttagaagtacgtcctgcaaatgatagagtacaacaaatt
attaagtttattcaaagaagacctaatgaagcaggaattatttattgtttgagtagaaaa
gctacagaacaattagctagtaaactgcaacaaaacaatattgatgcaaaggcatatcac
gcaggattatcttttgaagaaagagctaaaactcaagaggcttttattaaagatgattgt
gaagtaatttgcgcgactattgcatttggaatgggaattgacaaatcgaacgttcgttgg
gtaatacactataacatgcctaaaaacattgaaggctattatcaagaaattggacgttct
ggtcgtgatggattacctgcaaaggctttattatttcatagttatgcagatgttattcaa
ctacgtcagtttatagagaataccggaaataaggaagttcaagaggcaaaattagaacgt
atgaagcaatttgctgaagccaccgtttgccgaagaaaaatattactcagttattttgga
gaactgattgaagaaaactgtgggaattgtgatgtatgtaagaatccaccacaatttttt
gatggaacagttattgcgcaaaaaggactctcagctatttaccgattacaaggaaaagaa
gctatgggaactgttatcgatgtacttagaggagcaaaaaatgccacggttttagataga
aactatgataagctaaaaacctacggtgttggtaacgatatttcttggagagattggcaa
cattatttaattcagttaactaatcaaggatattgtcaaatagcttttcatttacataat
agtttgcaacttacagagttctcaaataaagtgctttttgaaggtgaaaaagtacaatta
acaactccagtagcgtttacaaaagaagtaaaaacggtaacaaaagagaaaaagaaaaaa
gcagttaaggatacgttatttgagcgtttgcgaaaactacgttatcgcattgcccaagaa
gaagatatagccgcctatttagtttttaatgatgctacacttaaagaaatagaaaatgaa
cgaccacaatctgacgaagaatttctagcaataagtggagtgggacagcgaaaattggaa
gtgtatggtgctgagtttatggaagagatcaaaacttttttaaacgaaaagaagaaaact
aaaaaagataccactttagaaacgtttaagttatataaagaaggatttacggttgaagga
atagcagagaatcgtggattaaaacctaccactattttttctcatttatctaagttatac
ctagagggaaaagatgtgagtttggatgagtttatagaggcagatacattagctttggta
gcaaatgccaaaaaagtattgaaaaatgagacagctttaaaaccttattttgaattttta
ggagaacaagttccatatgaaaaaatacgagtaggattgaccattttacgaaggaaagga
tag
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