Tenacibaculum singaporense: D6T69_15285
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Entry
D6T69_15285 CDS
T09846
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsig
Tenacibaculum singaporense
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsig03032
]
D6T69_15285 (topA)
03400 DNA repair and recombination proteins [BR:
tsig03400
]
D6T69_15285 (topA)
Enzymes [BR:
tsig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
D6T69_15285 (topA)
DNA replication proteins [BR:
tsig03032
]
Prokaryotic type
DNA Topoisomerases
D6T69_15285 (topA)
DNA repair and recombination proteins [BR:
tsig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D6T69_15285 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF3271
Toprim_2
Toprim_4
NAD_binding_3
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
AZJ36826
UniProt:
A0A3Q8RSX9
LinkDB
All DBs
Position
complement(3374503..3376989)
Genome browser
AA seq
828 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFQVESSFGHIADLPSKELGVNVEGDFKPKYIVSTDK
KAVVKKLKDLAKKAETVWLASDEDREGEAIAWHLAEQLKLKNENTKRIVFNSITKNAILK
AIENPRTINYNLVDAQQARRVLDRIVGYELSPVLWRKVKPGLSAGRVQSVAVRLIVERER
EIEGFTPVASYRVDAEFVNAEGKKFKAKLAKNFSTKKEAENFLNSCLGAEFSVADLQKKP
AKKSPAPPFTTSTLQQEASRKLGFPVAKTMMVAQRLYEAGLITYMRTDSVNLSDDAKKAA
QAEIIASYGEEYSKPRNYATKSKGAQEAHEAIRPTNMENHEITGEYDQTRLYSLIWKRTL
ASQMSEAKLERTVVKIDNNKNKKQFTANGEVITFEGFLKVYLEGTDNEEEEQAGMLPKME
VNEELINELITATERYTRPPARFSEASLVKQLEELGIGRPSTYAPTISTIQRREYIEKGT
VEGKERNYTQLSLANQEVSEQILTERVGSDKGKLVPTDIGNIVNDFLVENFDAILDYGFT
AKVENEFDEIAEGKEDWIAMIKDFYKNFHVVVEDVAANAERAKGERLLGVDPESGKNVYV
RLGRYGAMVQIGEATDEEKPRFASLQGDQTMNSITYEEAMDLFKLPKTLGDYEEKEVVVA
NGRFGPYIKFDGKYVSLDKGENPMSVDMDRAIELIEAKRKADAPIGEYEGMPIQKGVGRF
GPFIKWNSIFINVNKKYDFDNLSQTDLEELIEDKKRKEREKLIHNFEEVGIRVEKARWGR
FNVIKGKIKVELPKTTEIEKLTQEEAVKMIEAKTPKKKTAKKKATKKK
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagtaatagttgagtcacctgctaaggcgaaaacaatagagaagttt
ttaggaaaggactttcaggttgaatcgagttttggacacattgcagacttaccatctaag
gaattgggtgtaaatgtagaaggagatttcaaaccgaagtatatagtttctaccgataaa
aaagcggtagtaaaaaaactgaaagacttagcaaagaaagcagaaactgtttggttagca
tccgatgaagaccgcgagggagaagctatagcatggcacttagcggaacaattgaagttg
aaaaatgaaaacactaagcgtattgtttttaactctattactaaaaatgcaattttaaaa
gcaattgaaaacccacgcacaattaattacaatcttgttgatgctcaacaagcaagacgt
gtgttagatagaattgtaggatatgaattatctcctgtattatggagaaaagtaaaacca
ggattgtcagcaggtagggtgcaatcggttgcagtacgtttaattgtagaacgtgaaaga
gaaatagaaggttttacaccagtagcttcttatcgtgttgatgcagagtttgtaaatgca
gaaggaaaaaagtttaaagcaaaattagcaaagaacttttcaacaaaaaaagaagctgaa
aatttcttaaattcttgtttaggagcagaattttctgttgctgatttacaaaaaaaacca
gcaaaaaaatctccagcaccgccatttactacatcgacgttgcaacaggaagcgtcaaga
aaattaggttttccagttgccaaaactatgatggtagcacaacgtttgtatgaagcaggg
ttaataacctacatgagaacagacagtgtaaacttatctgatgatgcaaaaaaagctgct
caagcagaaattatagcttcttatggtgaagaatatagcaagccacgtaattatgcaact
aagtctaaaggagcacaagaagcgcatgaggcaattcgtccgactaacatggagaatcat
gaaattacaggtgagtatgatcaaacaagattgtatagcttaatttggaaacgcacatta
gcttcacaaatgagtgaagctaagctagaacgtaccgtcgtaaaaatagataacaataag
aataaaaagcagtttactgcaaatggagaggtaattacttttgaaggatttttaaaagta
tatttagaaggtacagacaacgaagaggaagaacaggcaggaatgttacctaaaatggaa
gtaaatgaagaattaataaacgagttgataacagcaactgagcgttacacacgtccgcca
gcaaggttttctgaagcatccttggtaaaacaattagaagagttaggtattggtcgccct
tctacgtatgcaccaaccatttcaactattcaaagaagggagtatattgaaaaaggaact
gtagaaggaaaagaaagaaattacactcaattaagtttagccaatcaagaagtgtcagag
caaattttaactgaaagagtaggttcagataaaggaaagctcgtgccaacagatatagga
aatatagtaaatgatttcttagtagaaaattttgatgcaattttagattatggttttaca
gctaaagtagaaaatgaatttgatgaaattgcagaaggaaaagaagattggatagcaatg
attaaagacttttataaaaactttcatgttgttgtagaagatgttgctgcaaatgcagaa
agagcaaaaggggaacgtttattaggtgtagatcctgaaagtggaaagaatgtgtatgtg
cgtttagggcgttacggagcaatggtgcagataggagaggcaactgatgaagagaaacct
cgttttgcaagtttacaaggtgaccaaacaatgaattcaattacctatgaagaggcaatg
gatttatttaagttgccaaaaacattgggagactatgaagagaaagaagtagttgtagct
aatggaagatttggtccttatattaaatttgatggtaaatatgtatcgttagataaagga
gaaaatccaatgtctgtagatatggatagagctattgaattgattgaagcaaaaagaaaa
gcagatgctcctattggagaatatgaaggaatgccaattcaaaagggagtagggcgtttt
ggcccttttattaaatggaactctatttttatcaacgtaaataaaaaatacgactttgat
aatttaagtcaaacagatttagaagaattaatagaagataaaaaaagaaaagagcgtgaa
aagctaatccacaattttgaagaggttggtattcgtgtagaaaaagcacgctggggacgt
tttaatgtaataaaaggaaagataaaggtagaactgccaaagacaacagagatagaaaaa
ctaacacaagaagaggctgttaaaatgattgaagcaaaaacacctaagaaaaaaacagct
aaaaagaaagcaaccaaaaaaaaataa
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