Tenacibaculum singaporense: D6T69_15700
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Entry
D6T69_15700 CDS
T09846
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D6T69_15700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsig03019
]
D6T69_15700
03016 Transfer RNA biogenesis [BR:
tsig03016
]
D6T69_15700
Enzymes [BR:
tsig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D6T69_15700
Messenger RNA biogenesis [BR:
tsig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D6T69_15700
Transfer RNA biogenesis [BR:
tsig03016
]
Prokaryotic type
tRNA degradation factors
D6T69_15700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AZJ36904
UniProt:
A0A3S8RAZ9
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All DBs
Position
3455652..3457880
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AA seq
742 aa
AA seq
DB search
MIPKVFNQVIELGDGRTITLETGKLAKQADGSVVVRMGDTMLLATVVSARTANPGIDFLP
LTVDYREKFAAAGRYPGGFMKREARPSNEEILTMRLVDRVLRPLFPKDYHAETQVMIQLM
SHDEEVMPDALAGLAASAAIQLSDIPFEAPISEVRVARINGEFIINPSATQLAEADIDLM
VGASNDFVAMVEGEMDEVSEEEMAEAIRVAHEAIKVQCDAQVALAEAFGKKETREYEGEA
EDEELAQKIHDAAYQKCYDIAKKGTSKQERGLAFSEVKEEVIAMFTEEELEEYGDLVGKY
FSKAHKAAVRDLTLNEGLRLDGRTTTDIRPIWCEVDYLPRTHGSSIFTRGETQALATVTL
GTSRDANMVDSPTMQGEEKFYLHYNFPPFSTGEARPLRGTSRREIGHGNLAQRALKGMIP
EDCPYTVRIVSEVLESNGSSSMATVCSGTMALMDAGVQMKKPVSGIAMGLISDGDRYAVL
SDILGDEDHLGDMDFKVTGTADGITACQMDIKIKGLSYEILVKALKQARDGRLHILEKLT
DTIATPNDDVKSHAPKMVNRVIPNDLIGAFIGPGGKHIQELQKETETTIVINEDPVTEEG
IVEILGTNQEGIDKVIARIDSMMFKPEKGSVYEVKVVKLLDFGAVVEYTEAPGNEVLLHV
SELAWERTNNVTDVVNLGDILDVKYFGIDPKTRKEKVSRKALLPKPEGYVARPPRDNNKG
RDNRNRDNRRDDRKPRQDKKES
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttaaccaagtaatagaacttggagatgggagaaccatcacatta
gaaacaggaaaattagcaaaacaagcagatggttctgttgttgtaagaatgggagataca
atgttattagcaacagttgtatcagcaagaactgcaaatccaggtattgactttttacca
ttaacggtagattaccgtgaaaaatttgcagctgcaggtcgttaccctggtggatttatg
aagcgtgaagcacgcccttcaaacgaagaaattttaacaatgcgtttagtagaccgtgta
ttgcgtccactattcccaaaagattatcacgcagaaactcaggtaatgattcaattaatg
tctcatgatgaagaagtaatgccagatgccttagctggtttagctgcctctgctgcaatt
caattatcagacatcccttttgaagcaccgatttcggaagtacgtgttgcacgtattaat
ggtgaattcattatcaaccctagtgctactcaattagctgaagcggatatcgacttaatg
gttggagcttctaatgactttgttgcaatggttgaaggagaaatggatgaagtttctgaa
gaagaaatggcagaagcaatccgtgtggcacacgaggctattaaagtacaatgtgatgct
caagtagcactggcggaagcttttggtaaaaaagaaactcgtgagtatgaaggagaagct
gaagacgaagagttagcacaaaaaattcatgatgcagcttaccaaaaatgttatgacatt
gctaaaaaaggaacttctaaacaagaaagagggttagctttttctgaagttaaagaagag
gttattgcaatgttcaccgaagaagaattagaagaatacggtgatttagtaggaaaatat
tttagtaaagcacacaaagcagctgttagagatttaactttaaatgaaggtttacgttta
gacggacgtaccactactgatattagacctatttggtgtgaggtagattacttaccaaga
actcatggttcatcaatctttacacgtggagaaactcaagcattagctaccgtaacttta
ggtacttctagagatgcaaacatggtagattctccaacaatgcaaggagaagaaaaattc
tacttacactataacttccctcctttttcaactggagaagcacgccctttaagaggaact
tctcgccgtgaaattggtcatggtaacctagctcaaagagctttaaaaggaatgattcct
gaagattgcccttatacagttcgtatagtatctgaagtattagaatctaatggttcttct
tcaatggctactgtttgttcgggtacaatggcactgatggacgcaggggttcaaatgaaa
aaaccagtttctggtattgcaatggggttaatttctgatggtgatcgttatgctgtttta
tctgatattttaggagatgaagatcacttaggagacatggactttaaagtaactggtact
gctgatggtattacagcttgtcaaatggatattaagattaaagggttgtcatatgaaatc
ttagtaaaagctttaaaacaagctcgtgatggtcgtttacatatcttagaaaaattaaca
gatactatcgctactccaaatgacgatgttaaatctcatgctcctaaaatggtaaataga
gtaattcctaacgacttaattggagcatttattggtccgggtggaaaacacatccaagag
ttacaaaaagaaacagaaactacgattgttattaacgaagaccctgttactgaagaaggt
atcgttgagattttaggaacaaaccaagaaggaattgataaggttattgctcgcatcgat
tcaatgatgtttaaacctgaaaaaggttctgtatatgaagtaaaagtagtgaagttatta
gattttggtgctgttgtagaatatactgaagctccaggaaatgaagttttactacacgtt
agcgaattagcttgggaacgtacaaacaatgtaactgacgttgttaatttaggagatatt
ttagatgtaaaatacttcggaattgacccaaaaacacgtaaagaaaaagtatctcgtaaa
gccttattacctaaaccagaaggttatgtagcaagacctcctagagataacaacaaagga
agagataatcgtaatcgcgataatcgtcgtgacgatagaaaacctagacaagataaaaaa
gaatcataa
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