Tenacibaculum singaporense: D6T69_15895
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Entry
D6T69_15895 CDS
T09846
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
tsig
Tenacibaculum singaporense
Pathway
tsig02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tsig00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D6T69_15895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsig03021
]
D6T69_15895
Transcription machinery [BR:
tsig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D6T69_15895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
DUF2730
UCR_14kD
DUF3793
NBAS_11th
Motif
Other DBs
NCBI-ProteinID:
AZJ36942
UniProt:
A0A3Q8RQ85
LinkDB
All DBs
Position
complement(3494046..3494909)
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AA seq
287 aa
AA seq
DB search
MRQLKITKQVTNRESKSIEKYLQEIGKIDLITADEEVELAQKIKTGDQRALETLVNANLR
FVVSVAKQYQNQGLRLSDLINEGNIGLVKAARRFDETRGFKFISYAVWWIRQSILQALAE
QSRVVRLPLNKIGSISKINKAVSKLEQSNERMPTPEEIAKVLDMTVSEVKQSMKNSGRHI
SMDAPLKEGETSNLYDVMKASEAPKPDKDLMQESLQLEISRSLETLSPRESDIIKLFYGL
ENYRPMSLTEIGEAFDLTRERVRQIKEKGIRRLKQRSRTKVLQTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacagttaaaaataacaaaacaagttaccaatagagaatcaaaatctattgagaag
tacttacaagaaataggtaagattgatttgattactgcagatgaagaggttgagttagct
caaaaaattaaaacaggtgaccaaagagcactagaaactttggtaaatgctaacttacgt
tttgtagtgtcggtagcaaaacaatatcaaaatcaagggttacggctttctgacttaatc
aatgaaggaaatattggtttggttaaggcagcaagacgttttgatgaaacgcgtggattt
aagtttatatcgtatgcggtttggtggatacgccagtctattttacaggccttagcagaa
caatctcgtgtggttcgtttaccgttgaataaaataggaagcattagtaaaattaataag
gctgtatctaagcttgaacaaagtaatgaacgtatgcctacgccagaagaaatagccaaa
gttttagatatgaccgtttcagaagtaaaacagtcaatgaaaaactctggaaggcatatt
tctatggatgcacctttaaaagaaggagaaacatcaaatttatacgatgtaatgaaagct
tctgaagctcctaagccagataaagacttaatgcaagaatctttacaactggaaattagt
agaagtttagaaacactatctccaagagaatcagatatcataaagctattttatggtcta
gaaaattaccgacctatgagtttaactgaaataggagaagcttttgatttaacaagagaa
cgtgttcgtcaaatcaaagagaaaggaattagaagattaaaacaacgatcaagaaccaaa
gtattacaaacttatttaggttag
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