Thermocoleostomius sinensis: OXH18_01015
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Entry
OXH18_01015 CDS
T09238
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
tsin
Thermocoleostomius sinensis
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsin03021
]
OXH18_01015
Transcription machinery [BR:
tsin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OXH18_01015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
Sigma70_ECF
HTH_24
HTH_Crp_2
HTH_8
HTH_3
KORA
HTH_17
HTH_30
HTH_AsnC-type
MarR_2
HTH_Tnp_ISL3
GerE
HTH_Tnp_4
Xre-like-HTH
DUF134
Motif
Other DBs
NCBI-ProteinID:
WAL60607
UniProt:
A0A9E8ZCW4
LinkDB
All DBs
Position
complement(244704..245477)
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AA seq
257 aa
AA seq
DB search
MLISITSELKSETLELLREYYKHPSASLRNRLVQLNYGLVRKEAHHWVNQCTESYEDLLQ
VGSMGLIRAIERFDVSKGHAFSSFAIPYIRGEIQHYLRDKGSPVRIPRRWQALQHQAANI
TRELQVKLNRQPTDAEVAAVLQISFNEWQEIKLAYRNRAPLSLDAPIRDEDEGSTSLGDL
VPDAQYHSFQLAQEDQIRLQQALVQLEKRTREVLEFVFLYDLTQKETAERLGISAVTVSR
RVKRGLKLLKKMMVTAA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcttatctcaattaccagcgaactcaaaagcgaaacgttagaactattgcgagagtat
tacaaacatccttctgcgtctctgcgtaatcgtcttgtgcaactgaactatggcttagtt
aggaaagaagctcatcactgggtcaatcaatgtacggaaagctatgaagatttactgcaa
gttggcagcatgggattgattcgggcgatcgagcgctttgatgtttccaaaggacatgcg
ttcagttccttcgccattccctacattcgcggcgaaattcagcactatctgcgggacaaa
ggctcgcctgttcggattccacgtcgctggcaagccctgcaacaccaagcggccaacatc
acccgcgaactacaggttaaactgaaccgccaacccaccgatgcagaagtagcagccgta
ctacagatttcattcaatgaatggcaagaaattaagctggcttaccgaaaccgtgcaccg
ctgagcttagatgcacctatccgtgacgaagacgaaggttccacctcgcttggtgatctt
gtaccggatgcccaataccacagctttcaactggcccaagaagaccaaattcgcttacag
caagccttggtgcaactcgaaaagcgcactcgtgaagtactggagtttgtttttctatat
gatctgacccaaaaagagaccgccgagcgcttgggcattagtgctgtaaccgtttctcgt
cgagttaaacgtggcttgaaactgttgaaaaaaatgatggtgacggctgcttag
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