Thermocoleostomius sinensis: OXH18_01285
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Entry
OXH18_01285 CDS
T09238
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
tsin
Thermocoleostomius sinensis
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsin03400
]
OXH18_01285
DNA repair and recombination proteins [BR:
tsin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OXH18_01285
Archaeal homologous recombinant proteins
OXH18_01285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
SbcC_Walker_B
AAA_21
AAA_15
AAA_29
ABC_tran_CTD
Rad50_zn_hook
ABC_tran
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
WAL60660
UniProt:
A0A9E8ZG94
LinkDB
All DBs
Position
307293..310460
Genome browser
AA seq
1055 aa
AA seq
DB search
MLTLVIPQQLTLKNFLSYREATLDFRGFHVACICGANGAGKSSLLEAIVWAIWGQGRATD
DDVIHLGVTETLVDFIFQYQHQTYRVIRSRQRGHATTLEFQIRTPNGFRSITEKGVRATQ
QLILQHLRLDYDTFINSAYLRQGRADEFMLKRPSERKQILSDLLKLEQYDHLAEQAREQA
RHLKAEINVLEQSLDRLAEQLQQEEALAIEQAQGQARLQQLQQQQQTDETQLRRLYHLQQ
QRQAGFQQLQLQQQQQEHLMQDCQRVQQELAAAQQQQRQLEILLQDAETIATHYAQFQRL
QAEEEVQSAKFQAQQVALAKRQQLQQQQADHQHALQDQRRQAQAQLDAIHQQQQDIRQTL
EKTADVEAALEQLRQARARLSELDGLQMKATPLMQRRQQVQTQLDRVQARLQARLEELQR
LADRLQQQQQQQPQLQQAVQSITNQIQHLETRRAYQQQVREKGMERRAFLERLQEQQREC
ERGIAELDHKIAMLSKRGTVELAHAEVSHGAETSDEPEVEAAASTTGLLTLESPRTVTAT
PHAYPPCPLCDRPLDQHHWQVVLDHHRHEQRELHHQLWVIREQLTTSDREIRILRQEYRD
VDKELSPYAGLLERRGQLQQQLQDVQLEQNRLEQITAEIQTLEQTLQQQTFATELHEELQ
LLDRSLNQLNYDDRDHALIRGEVDRWRWAEIKHAEIKQAQRRWNQLSEQIPALEQTIATL
DQQLQTLSTSPLQQQIYELDRHLAAIDYSIEHHTALRQSLRQAQTWQLRYQELLQAQNNY
PHMQQKVRELTDLWVQRTQTLQQLRLQEASLAAQLQQTPDPTEQLHILEHQMQQRRIDLD
RQLADLGRLQQQQQQLEWVKEQHATLSTQIQTARRQYRIHQELTQAFGRNGIQALMIENV
LPQLEAETNQILGRLSANQLHVQFVTQRAKRSGSARSSDKLIDTLDILISDMQGTRPYET
YSGGEAFRVNFAIRLALARLLAQRSGMALQLLIVDEGFGTQDEAGCDRLIGALNAIAPDF
ACILAVTHMPHLKEAFQTRIEVYKTDRGSQLRLVS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacactggtgattccacaacaactgacgctgaaaaattttttgagctatcgagag
gcaacgttagattttcgcggttttcacgttgcctgtatttgtggtgccaatggagccggg
aaatcgtcgctgttagaggcgatcgtgtgggcaatttgggggcaaggacgcgccactgac
gatgatgtgattcatctgggcgtcaccgaaaccttggtggattttatttttcagtatcag
catcaaacctaccgggtaattcgatcgcgtcaacgaggacacgccaccactctagaattc
cagattcgcacacccaacgggtttcgcagcatcaccgaaaaaggcgtccgcgccactcag
caattgatcttgcagcacctgcggctagactatgacacgttcatcaactcagcctatcta
cggcaaggtcgagccgatgagtttatgctgaaacgccctagtgagcgtaaacaaatcttg
tcagatctgctgaagctagaacagtacgatcacttggccgaacaagctagagaacaagcc
agacacctgaaagcggaaattaacgttttggagcaatccttggacaggttggctgaacaa
ttgcagcaagaagaagcattggcgatcgagcaagcccaagggcaagccaggttgcaacaa
ttgcagcagcagcaacagaccgatgaaactcaattgcgacgactctaccacttgcaacag
cagcgccaagccgggtttcaacaactgcaattacaacagcagcagcaagagcacctgatg
caggactgtcaacgggtgcagcaagaactagccgccgctcagcaacaacaacgccagttg
gaaatccttctgcaagatgcagaaacgatcgccacgcactatgcccaattccagcgattg
caagccgaagaagaagttcaaagcgccaagtttcaggctcaacaggtcgccctagccaaa
cgccagcaacttcagcagcagcaagccgaccaccagcacgccctgcaagatcaacgacgg
caggcccaagctcaactcgatgccattcatcaacaacagcaagatatccgccaaacccta
gagaaaaccgcagacgtagaagccgcgctagaacagttgcgccaagccagagcgcgattg
agcgaattggacgggctgcaaatgaaagcaaccccgctgatgcaacgacgacaacaggtg
caaacccaactcgatcgagtacaggctcggctacaagcacgcctagaagaattgcaacga
ttagccgatcgcttacagcagcagcaacagcagcaaccccagcttcaacaagcggttcaa
tcgatcaccaatcaaattcagcatctagaaacccgacgggcatatcaacagcaagtccga
gaaaaaggcatggagcgacgggcatttttagaacgtctgcaagaacagcagcgcgaatgt
gaacgcggcattgcggaacttgatcacaaaattgctatgctatcgaaacgcggaacggtg
gaactcgctcatgcagaggtcagtcatggggctgaaacgtcggatgaaccagaagtcgag
gcggcagccagtacaactgggttgctcaccctggaatctcctcgtactgtaacagcaact
cctcacgcttacccaccctgtccactgtgcgatcgccctttggatcaacaccattggcaa
gttgtgttagaccatcatcgtcatgaacagcgagaattgcatcatcaactgtgggtaatt
cgagaacaactcactacctccgatcgcgaaattcggattttgcggcaagagtaccgcgat
gtagataaagaattatcgccctatgctggtctattggaacgaagaggacaattacagcaa
cagctacaggatgttcaactggaacaaaatcgacttgagcaaattaccgctgaaattcag
acgctggaacaaactcttcaacagcaaacctttgcaacggaactgcacgaagaattgcaa
ttgctcgatcgcagcttgaatcagttgaactatgatgatagagatcacgccctaattcgc
ggagaagtcgatcgctggcgctgggccgaaattaaacatgccgaaattaaacaagctcaa
cgtcgctggaatcaactcagtgaacaaattccagcccttgaacaaacaatcgccacctta
gatcaacaactgcaaacactttcaacctcaccattgcagcaacaaatctatgaactcgat
cgtcatctcgctgcgattgactattccattgaacatcacactgcattgcgacaatcgttg
cgacaagctcaaacctggcagttgcgctatcaagaacttttacaggctcagaataactat
ccccacatgcagcaaaaagtgcgggaactgactgatttgtgggtgcaacgaactcaaacc
cttcagcaacttcgtttacaagaagcatccctcgcggcgcaacttcagcaaaccccagat
cccactgagcaactgcatatccttgaacaccagatgcagcaacgccgaatcgatctcgat
cggcagttggccgatttaggacggcttcaacaacagcaacaacagctagagtgggtgaaa
gaacaacatgcaaccctcagtacacaaatacaaacagcgcgacggcaatatcgcatccat
caagagctaacccaagcctttggtcgcaatggcattcaagcgctgatgattgaaaatgta
ttgccgcaactagaagctgaaaccaaccaaattttgggacgcctcagcgcaaatcagtta
cacgtacagtttgtgacgcaacgagccaagcgcagcggttcggctcgcagttcagacaaa
ttaatcgacacccttgacatcttgattagcgacatgcaaggcactcggccttatgaaacc
tattcaggcggggaagcctttcgcgtcaattttgcgattcgtttggctttggctcgacta
ttggcccaacgatcgggcatggccttgcaactattgattgtagatgaaggatttggcacc
caagatgaagcaggttgcgatcggctaattggggcactgaatgcgattgcccccgatttt
gcctgtattctagcggtgactcatatgccccatttgaaagaagcgtttcaaacccgcatt
gaagtctacaaaaccgatcgcggatcgcagttgcggttggttagttag
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integrated database retrieval system
