Thermocoleostomius sinensis: OXH18_05380
Help
Entry
OXH18_05380 CDS
T09238
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
tsin
Thermocoleostomius sinensis
Pathway
tsin03410
Base excision repair
tsin03430
Mismatch repair
tsin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OXH18_05380 (recJ)
03430 Mismatch repair
OXH18_05380 (recJ)
03440 Homologous recombination
OXH18_05380 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsin03400
]
OXH18_05380 (recJ)
DNA repair and recombination proteins [BR:
tsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
OXH18_05380 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OXH18_05380 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
OXH18_05380 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Exonuc_VII_L
FapA
CENP-Q
STX6_10_61_N
DUF3332
LRS4
DUF3584
FAM76
Motif
Other DBs
NCBI-ProteinID:
WAL61423
UniProt:
A0A9E8ZE04
LinkDB
All DBs
Position
1235134..1238412
Genome browser
AA seq
1092 aa
AA seq
DB search
MSRFPNQRWQIASADPVRSVQLADLTEVSPLLAQVLLNRGIDTPEAAETYLNPELQRLPS
PLEEFPDLPIALDLLLRAIGTHQPIAICGDYDADGMTSTALLLRALRVMGAIVEYAIPSR
MQEGYGINQRIVEEFYNEGVGLILTVDNGIAAYEPIARARQLGLTVIVTDHHDIPEQLPP
ANAILNPKLIDEASPYRGVAGVGVAYILAICLAQCLQKTQDLTTPLIELFTLGTIADLAP
LTGVNRRWVKRGLKLLPKSRLPGVQALIQVAGLSNEKELKPEAIGFRLGPRINAIGRIAD
PQIVIDLLTTDDEGRALELAMKCEQVNQLRQRLCELIEQEAIAWCEQRAINCQHERVLVV
VQPGWHHGVIGIVASRLVERYGVPVFIGTYEEEDEHHIRGSARGIPEFNVFEALQFCDSV
LEKYGGHRAAGGFSLKAENLEAFRSQLRLFAHGQLQPQYLKPLVTIDAQANFSDLTLDFY
KQLDVLHPCGIENPDPVFWTPNVRILDQKAIGRQQAHLKLTLVQESGIRSSESGVGITLE
SQPSITNYQLPTSIKAIAWRWGEFYPLTSPLDVAYRLRLNDWNGVQTVELELVGVRVPEG
NDGEGELADITTQPTIQSVMTDHDRSTGVGAVSPSPTLLGADSASESPPPKSSPSMARRS
KSLARSITHPVEPPSPSPANPMSVAEGSEEIQSNQDSANNTTSNTASNTISAKISSPRIE
FYYNKRKYTCGLLQVGENHELRIRNWEGQVLTVQPQQRRGLLGKRRDDAREIDVSHPHYF
NLIRAALNALDLAEKMLLIQAKDHLLAAKDQQIEMLNQQLQMLDRQLTQLSQEQQQQFQT
LQSELQQRQTLVQNHETQIAQLQQQLSQHKPLPKPEELKHQARSQLGDSVWKCLNPHSQK
DLTAALKHYYSIQAETFTASVTDYSEAGLRLGCAVEREVIQPFFRQLHQFLLNNDGLDEI
GGVTLRPRKRYTLGMLPPLLSSQWYSFRDTILTTCTQLPEEDFYCTIKWDQVHQPDRDRI
NAFLNQWDHAVAHWLLKHKVAAASAIDQINKLRNVAAHAENSLYQWQYDLMQVLVMGSET
QFGIFQDIYGTL
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gtgtctcgatttcccaaccaacgatggcaaattgcatcagccgacccagtgcgatcggtg
caattggctgatctgactgaggtttcaccgctgttagcccaggtgctactcaatcgtggt
atcgatacgccggaagcggccgaaacttatctcaaccccgaattacagcgattgccatca
ccgctagaagaattccccgatctaccgatcgccctagatttattgctgcgagcgattgga
acccatcaacccatcgccatttgcggcgattatgatgccgatggcatgaccagtaccgcg
ttgctgctgcgagccttgcgggtgatgggagcgatcgtggagtatgccattcccagccgg
atgcaggaaggctatggcattaatcagcgcattgtcgaagagttttacaacgaaggggtg
ggattaattctgacggtggacaatggtattgccgcctatgagccgatcgcccgtgccaga
caactgggtttaacggtgattgttacagatcatcacgatattccagaacaattgccgcct
gcaaatgccatcttaaatccgaagctaattgatgaagcatcgccctatcgtggggtggca
ggagtgggcgtagcgtatattctggcaatttgtttagcacaatgccttcagaaaactcaa
gacctgacgacacccttaattgagttgtttacactgggcacgatcgcggatttggctcca
ctgaccggggtaaaccgacgctgggtgaaacgggggctaaaattactgcccaaatcgcgg
ctgccgggggtacaggcattgatccaagtggcagggctgagcaacgagaaagaattgaaa
ccagaggcgatcggctttcgcttagggccacgcattaatgccattggtcgcattgctgac
ccgcaaattgtgattgatttgctgaccacagacgatgagggtcgcgccttggaattggcg
atgaaatgtgaacaagtcaaccaactgcggcaacgattgtgtgaattaattgagcaagag
gcgatcgcttggtgtgaacaacgtgcaatcaattgtcagcacgagcgggtgttagttgtc
gtgcaacctggttggcatcatggcgtcattggtattgtggcgtcgcgactagtggaacgc
tatggcgtccccgtgttcattggcacctatgaagaggaggacgagcaccacattcgcggt
tcagcccggggtattcccgaatttaatgtgtttgaagcgctacaattctgtgattcggta
ttagagaaatatggcggacaccgagcggcgggcggcttctcgctgaaggcagaaaaccta
gaagcatttcgatcgcaattgcgtttgtttgcccatggacaactgcaaccccagtatcta
aagccattggtgacaatcgacgcacaagccaacttcagcgacctcacgctggacttctac
aaacaactcgacgtgttacacccgtgcggcattgagaatcccgatccggtgttctggacg
cccaatgttcggattctggatcaaaaggcgattggacggcaacaggcacacttgaagttg
acgttggtgcaggaatcgggaatccggagttcggagtccggagtcggaataactttagag
tcccaaccttcaattaccaactaccaattaccaacatccatcaaagcgatcgcctggcgc
tggggtgagttctatcccctgacgagtccgctggatgtggcatatcgactgcggttgaat
gattggaatggcgtgcagacggtggagctagagttggttggggtgcgagttcctgaagga
aatgatggagaaggggaactggctgacataacaactcaacccacgattcaatctgtgatg
acggatcacgatcgatcgacgggggttggagcggtatctccatcgccaaccttgctagga
gcggattctgcatcagaatctccacccccgaaatcttcaccgtccatggcgcggcgatcg
aaatcgttggctcgatcgattacgcatccggtcgagccgccctcgccctctcccgcaaac
cctatgtctgttgccgagggttcggaggagattcagtcgaatcaagacagtgcaaacaat
acgacatccaatactgcttccaatacaatctctgctaaaatcagttctcctcgcattgag
ttctactacaacaagcgcaaatatacctgcggacttttgcaagtgggtgaaaatcacgaa
ttgcgcattcgcaattgggaaggacaagttctcacagtgcaaccacaacaacgacgcggt
ttactgggcaagcgacgagacgatgccagagaaattgatgtgtctcatccacactatttc
aacttgattcgggcagcattgaatgcgctcgatctcgccgaaaaaatgctgctcattcaa
gcgaaagatcacctgctggcagccaaagatcagcagattgaaatgctcaatcagcagttg
caaatgctcgatcgtcaattgacgcaactgtcgcaagagcaacagcaacaatttcaaacg
ctgcaatctgagttacaacagcgacaaactttggttcaaaatcacgaaacacaaattgcc
caactgcaacagcagcttagccaacacaaaccgctaccgaaacccgaggaacttaaacat
caagctcgatcgcaacttggtgatagcgtttggaaatgtttgaatcctcacagtcaaaag
gatctaactgctgccctcaagcactattactcgattcaagctgaaacctttacagcgtct
gtcaccgattactctgaagcaggattgcggctcggatgtgcggtggaacgagaagtgatt
caacccttctttcggcaattacatcaatttctactcaacaacgatggcttggatgaaatt
ggtggggtaacgctgcggcctcgtaaacgctatactttgggaatgttgccgccgctgttg
tcgtcacaatggtattcatttcgcgacaccattttgacaacctgtacgcagctacccgaa
gaggatttttactgcacgattaaatgggatcaggtgcatcaacccgatcgcgatcgcatt
aatgctttcttgaatcagtgggatcatgccgtggcccactggctcttgaaacataaggtg
gcggccgcgtctgcgattgatcaaatcaataaactgcgtaacgttgcagcccatgctgaa
aattcgctgtatcaatggcagtacgacctgatgcaggttctggtgatgggcagtgaaacc
caatttggtatttttcaagatatttatggaactttgtag
DBGET
integrated database retrieval system
