Thermocoleostomius sinensis: OXH18_14160
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Entry
OXH18_14160 CDS
T09238
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsin
Thermocoleostomius sinensis
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsin03032
]
OXH18_14160 (topA)
03400 DNA repair and recombination proteins [BR:
tsin03400
]
OXH18_14160 (topA)
Enzymes [BR:
tsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OXH18_14160 (topA)
DNA replication proteins [BR:
tsin03032
]
Prokaryotic type
DNA Topoisomerases
OXH18_14160 (topA)
DNA repair and recombination proteins [BR:
tsin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OXH18_14160 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WAL58330
UniProt:
A0A9E8Z8A4
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Position
3272613..3275390
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AA seq
925 aa
AA seq
DB search
MSTLVIVESPTKAKTIRNYLPRGYRVEASMGHVRDLPQSASEIPASVKGQDWAKIGVNVE
ADFEPLYVIPQDKKKVVKALKEALSDADELVLATDEDREGESISWHLLQVLKPKVPIKRM
VFHEITEEAIQEALNHCRTVDEQLVRAQETRRILDRLVGYTLSPLLWKKIATGLSAGRVQ
SVAVRLLVNRERERRAFRKGTYWDLKASLEKDKTPFEAKLVTLRGARIATGADFDETTGQ
IAAGRNVLLLGEEEARSLQERLQNEVWTVTNIEERPTTRKPSAPFTTSTLQQEANRKLRL
SARETMRTAQNLYEQGYITYMRTDSTNLSQQAISAARSCVEQMYGKDYLSPQPRQYATKS
KGAQEAHEAIRPAGSTFRTPQETGLSGRELKLYDLIWKRTVATQMAEARQTHITVQIEAG
DAGFRATGKRIDFPGFFRAYVEGSDDPNAAIEDQEVILPRLRAGDHPECKELEAIGHETQ
PPARYTEASLVKTLESEGIGRPSTYATIIGTIIDRGYAQMVNNSLVPTFTAFAVTALLEK
YFPDLVDPQFTARMEQTLDEISTGEARWLPYLRQFYLGETGLETQVKRQESQIDPNEARS
VPLDGLDVKVRIGPYGAYLEVEDEAGPVRANIPLDMPPADLDPQQVDVLLRQKTEGPDKL
GFHPDTGEPIYALIGPYGPYVQLGDKTDDNPKPKRASLPKGTTLQDVTLDMAVNLLALPR
TLGVHPETGAKIQANLGRFGPYIVHDQGKDGKDYRSLKKEDNVLTITLERALELLAEPKT
GRGRSKAAAKPLRELGPHPEDGEPVNIYNGPYGPYIKHGKINASLPEGQTIEAIPMDVAL
QALAEKASTKKKTGRSKSTTSKTAAEPSTAEATTAETKTAKKSTAKKATSKKTTKTAAKT
AKTSKTSTSRKSTKSNESSNESSKA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactcttgtcattgttgaatccccaaccaaagccaaaaccatccgaaactatctc
cctagaggctatcgagttgaagcatcaatgggacacgtgcgtgatttgccacagtctgcc
agcgaaattcctgcctcggtgaagggacaagattgggccaagattggggtaaacgtggaa
gcagattttgaaccgctttacgtaattccacaggacaagaagaaggtcgtgaaggcactc
aaagaagccctcagcgacgccgatgaattagtgctggcaacggacgaagaccgtgaagga
gaaagtatcagttggcacttgctccaggtgctaaagcccaaagtgccaatcaagcgcatg
gtgtttcacgaaattaccgaggaggcgatccaagaggccctcaaccattgccgcacggtg
gacgaacaactggttcgcgctcaagaaactcgacggattctcgatcgtttggtggggtat
acgctgtcgccgctactgtggaaaaagattgctacggggctatcggctgggcgggtacag
tcagtggcggtgcggctgctggtaaaccgcgaacgggaacggcgcgccttccgcaaaggc
acctactgggatctcaaagccagcttagagaaagacaaaacaccgtttgaagccaagctg
gtgacgctgcggggcgctcgcattgccaccggggccgattttgacgaaaccactggacag
attgccgccggacggaatgtgctgttgttgggcgaagaagaagctcgatcgctgcaagaa
cggctacagaatgaagtatggactgtcaccaacattgaggaacgccctaccacgcgcaag
ccgtcggctccgttcaccacctccactctgcaacaggaagccaaccgcaaactgcgactg
tcagctcgagaaaccatgcggacagcacaaaacctgtacgagcaaggctacattacctac
atgcgaaccgactctactaacctgtcacaacaggcaatcagtgctgcccgatcctgcgta
gagcaaatgtacggcaaggactatctcagtcctcagccgcgtcagtatgcaactaaaagc
aaaggcgcccaagaagcccatgaagcgattcgtccagcgggtagcacgttccgtaccccc
caagaaaccggattatcgggacgggaactgaagctctatgacctcatttggaagcgtact
gtcgccacccagatggccgaagcccgccaaacccacatcacggtgcaaattgaagcaggc
gatgcaggatttcgcgcgacgggcaaacgcatcgactttccaggcttttttcgtgcctat
gtggaaggatcggacgatccgaatgcagcgatcgaagatcaggaggtgattctgccccgt
ctgcgtgccggagatcatccagagtgcaaagaactggaggcaatcgggcatgaaacccaa
ccgcccgcccgttataccgaagcctcactggtgaaaacgctggaaagcgagggcattggt
cgtcccagcacctacgccaccatcattggcacaatcatcgatcggggctatgcccagatg
gtgaacaatagcctagtgcctaccttcacggccttcgcagttacagccctgctagaaaaa
tattttcctgatttggtcgatccgcaattcaccgctcgaatggagcaaaccctagacgaa
atttccacgggtgaagcccgatggttgccctacctacgccagttttatttgggagagact
gggctggaaactcaagttaaacggcaggaaagccagattgatccaaacgaggcccgatcg
gtcccgttagatggactagatgtaaaggtacgaattgggccttatggagcctatctagag
gtagaggacgaggcagggccggtgcgggccaatattcccctagatatgccacccgcagat
ctcgatccgcaacaagttgatgtattgctgcggcagaaaaccgaagggcccgacaaactt
ggattccatccagatacgggcgaaccaatctatgctctgattggaccttacggaccttat
gtgcagttgggcgataaaaccgacgataatcccaagcccaagcgggcttcactgcctaag
ggcacaactctacaggatgtcaccctagatatggcggtgaatttgctggcattgccgcgt
acgctgggcgttcatcccgaaactggagccaaaattcaggcaaatctggggcggtttgga
ccctacatcgtgcacgatcaaggtaaggacggcaaggattatcgctctctcaaaaaagaa
gacaatgtcctcacaattacgctggagcgagccttagaactgttggcagaacccaaaact
ggacgtgggcgcagcaaagcagcggcgaaacccttacgcgaactgggaccccatcccgag
gacggcgaacccgtgaatatctacaacggcccctatggaccctatatcaaacacggtaaa
atcaatgcctctttgcccgaaggacaaacgatcgaggcaatcccgatggatgtagcccta
caagccctagccgagaaagctagcacgaagaaaaagacaggacgttctaaatcgacaact
agcaagactgccgctgaaccaagtacagctgaagcaacaaccgccgaaaccaagacggcc
aagaaatctaccgcgaaaaaagccaccagtaagaaaacaacaaaaactgctgcaaagacg
gctaaaacctctaaaaccagtaccagccgtaaatcgacaaaatcgaacgaatccagtaat
gagtcaagcaaagcttag
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