Thermocoleostomius sinensis: OXH18_15750
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Entry
OXH18_15750 CDS
T09238
Name
(GenBank) ribonuclease R
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
tsin
Thermocoleostomius sinensis
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsin03016
]
OXH18_15750
Enzymes [BR:
tsin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
OXH18_15750
Transfer RNA biogenesis [BR:
tsin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
OXH18_15750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
WAL58628
UniProt:
A0A9E8ZC15
LinkDB
All DBs
Position
complement(3647801..3649843)
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AA seq
680 aa
AA seq
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MEKGTLIEFRLQGDNTSDKTRPRRLAVVDRPEGKKHWIAIDERGQPHTLHPRQISYVIAG
QSYKPTDIAGFWQSIQPYLDPSSLEVAWELLVEDGEPVDPAAMAMLLFSEQSPLLCYAAY
YLLSEDKFYFKQKGDRYEPRSAAQVTELKHQSSMEAQRLLEWQGFLERLQAALSGETVEW
QSSDRPRLESLERYAVFAEEANHRAPALETLSALGRPETSQAAFQLLVDLQLWSPHENLF
LRRSQLPTQFPSKVLEMAQRHLNCPPPDPDTNRLDLTHLKLYTIDDESTREIDDGLSVEF
LADGKQRLWIHIADPARWVTPGDELDLEARRRCTTVYLPTGMIPMFPTELATGPMSLNQG
QVCTALSFGVVLHETGEVEDYEIHASLVKPTYRLTYEDVDEMLELGIQAEPELEAIATWA
KRRQAWRQSQGAISIHMPESSIKVCDDEITIQVLEDSLSRNLVAEMMILAGEVAGRYGEA
HNLALPFRGQAQPELPSEGELLQLPPGPVRDCAIRRCMPRSEVSITPFRHASLGLDTYTQ
VTSPIRRYTDLLAHFQIKAHLRGEPLPFSTATTQELIQTISSTAYEATLVERHTNRYWGL
EFLRRHSEDVWQALLLRWLREHENLGLVLLEELGLEMAMRFNRPIEVGDRLHIRVAYADP
RQDIIQFTEVSPSTVQAVAG
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggaacccttattgaatttcgactgcaaggtgataatacctcagacaaaact
cgtcctcgccggttagcggttgtcgatcgccccgaaggaaagaagcactggattgcgatt
gatgagcgcggacagccgcatactctacatccacggcaaattagctatgtgatagctgga
cagtcgtataaaccaacggacattgctgggttttggcagtcaattcaaccctatcttgat
ccctccagtttagaagttgcgtgggaactgttagtcgaagatggggagccagttgatcca
gcagcaatggcaatgttgctgttttcggaacaatcgccattactctgttacgctgcttac
tatttgctgtccgaagataagttttacttcaagcagaaaggcgatcgctatgaacctcgc
tcggctgcccaagtgacggaattgaagcatcaatccagcatggaagcgcagcgacttctg
gaatggcaagggttcttagagcgtctgcaagccgccttgtcaggagaaacagtagaatgg
caaagtagcgatcgtcctcgtcttgagtccctagagcgttatgctgtctttgcagaagag
gcgaatcatcgagcgcccgccctcgagacattgtctgctctaggtcgcccagaaacctca
caagccgcttttcaacttctagtggatctgcaattgtggagtccccacgaaaacttgttt
ttgcggcgcagtcagcttcctactcagttccctagcaaggtgcttgaaatggctcaacgc
cacctcaattgtccgccgcctgatccggatacgaaccggctcgatctgacgcatcttaag
ctatatacgatcgacgacgaaagcacacgtgaaattgatgatggcctaagcgttgagttt
ttagctgacggcaaacagcggttatggattcacattgccgatccggcccgctgggtcaca
cctggtgatgagttagatttggaagcccgtcgccgttgcacgactgtgtatctccctacg
ggaatgatccccatgtttcccactgaattggcaactgggccaatgagcctcaatcagggg
caggtgtgtacggcgctcagttttggcgtagtgctgcacgaaactggggaggtggaagac
tatgaaatccatgccagtttggtaaagcctacctatcgcctcacctatgaagatgtagac
gaaatgctagagttggggattcaagcagaacctgaactggaagcgatcgccacctgggca
aaacgacggcaagcttggcgacagtcgcaaggggcgatcagcattcacatgccagagtca
tcgattaaagtgtgtgatgatgaaatcacgattcaagtgctggaagattccctctcgcgc
aatctcgttgccgaaatgatgattttggcaggcgaagtggcgggacgctatggcgaagct
cacaatttggcgctgccgttccggggacaggctcagccagagttgccctcagaaggggaa
ctgttgcagttaccgcctggcccagtgcgtgattgtgccattcgacgctgtatgccccgc
agtgaagtgagcatcacgccgtttcgtcatgccagtttggggttagatacttatactcaa
gttacttcccccattcggcgttacacggatttgttggcgcattttcaaatcaaggctcat
ttgcgcggtgagccactgcctttctcaaccgccacaacccaagaactcattcaaaccatc
agcagcactgcctatgaagccacactagtggaacggcacacgaaccgctattggggctta
gagtttctgcggcggcattccgaggatgtgtggcaagcgttgctgttacgttggctgcgt
gagcacgaaaacttggggttggtgctactggaggaactgggactggagatggccatgcgc
tttaaccgcccgatcgaggtgggcgatcgactgcacattcgagtagcgtatgctgatccg
cgtcaggatattatccagtttacagaggtttctccgtcaacggtgcaggcagttgcgggt
tag
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