Thermocoleostomius sinensis: OXH18_16555
Help
Entry
OXH18_16555 CDS
T09238
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tsin
Thermocoleostomius sinensis
Pathway
tsin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OXH18_16555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsin03019
]
OXH18_16555
03016 Transfer RNA biogenesis [BR:
tsin03016
]
OXH18_16555
Enzymes [BR:
tsin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OXH18_16555
Messenger RNA biogenesis [BR:
tsin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OXH18_16555
Transfer RNA biogenesis [BR:
tsin03016
]
Prokaryotic type
tRNA degradation factors
OXH18_16555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
aRib
KhpA-B_KH
KH_2
Motif
Other DBs
NCBI-ProteinID:
WAL58780
UniProt:
A0A9E8Z937
LinkDB
All DBs
Position
complement(3816718..3818868)
Genome browser
AA seq
716 aa
AA seq
DB search
MLGEIDKSISVDGRDIRLKVGLLAPQAGGSVLIQSENTAVLVTATRAPAREGIDFLPLIV
DYEERLYAAGRIPGGFLRREGRPPERATLTSRLIDRPLRPLFPSWLRDDIQVVATTLSLD
ERVPPDVLAVTGASIAVMLAKIPFHGPMAAVRVGLIGDDFIINPTYDEVEQGDLDLVVAG
SPDGVIMVEAGANQLPEQDIIEAIDFGYEVVRDLIQAQRDMLSELGITVTEEAPTPPEPI
LENFISERVTDSVKQILTRFELTKPERDQALDEVKATLEATIAELPEDDPIQELVSSDSK
ALDNTYKSITKKLMRKQIIEEGVRVDGRKLNEVRPISCRTGILPPRVHGSALFQRGLTQV
MSVVTLGTPGEAQELDDLHPDEEKRYMHHYNMPPYSVGETKPMRSPGRREIGHGALAERA
LVPVIPPKEKFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIEKPVSGAAMGLIK
EGEEVRILTDIQGIEDFLGDMDFKVAGTDGGITALQMDMKITGLPMNIVSDAINQARPAR
MHILEKMLAAIDQPRTELSPFAPRLLTIKIDPDLIGLVIGPGGKTIKGITEQTGAKVDIE
DDGTVTISAVDGSKAKQARGIIEGMTRKLNAGDVYVGRVTRIIPIGAFVEFLPGKEGMIH
ISQLADYRVGKVEDEVAIGDEVIVKVREIDSRGRINLTRLGIHPDEAAAARSAVTT
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgctaggagaaatagataagtcaatatccgttgatggtagggatattcgactcaaagta
ggtctgcttgcgcctcaagcaggcggttcagtattgattcagtctgaaaatacagccgtt
ttggttacggcaactcgcgcacctgctagagaagggatcgattttctgccgctaattgtg
gattatgaagagaggctatatgctgccgggcgcattccgggaggcttcttgcggcgggaa
ggacgccctcctgagcgggctacgctaaccagtcgcttgatcgatcgaccgttgcgaccg
ctgtttcccagttggctacgagatgatattcaagtcgtggctaccacgttgtcgttggat
gagcgcgtgccgcccgatgttttagctgtcacgggagcctctattgccgtgatgctagcc
aaaatcccctttcatggcccaatggcagcggtgcgcgttgggttgattggcgatgatttt
atcattaaccccacctacgacgaagttgaacagggtgatctggatctggttgtggctggc
tcgcccgatggtgtcatcatggtagaggcaggcgcgaatcaattgcccgaacaagatatt
atcgaagcaatcgattttggctatgaagttgtgcgcgatttgattcaggctcagcgcgac
atgctcagcgagttgggcattacagtgactgaagaagcgccgacccctcctgaaccaatc
ctagagaatttcatcagcgaacgggtgacagattcggtgaagcaaattctgacccggttt
gaactgaccaagccggaacgcgaccaggcgttagatgaggttaaagcaacgctggaagca
acgatcgctgaattgccagaagatgaccccattcaagaactggtttcctccgattccaag
gcgttggataacacctacaaaagcatcaccaaaaaactgatgcgcaagcaaattatcgag
gaaggggtgcgcgtagacgggcgcaaactgaatgaggtgcgtcccatttcttgccgaact
ggaatcttgccgccccgagtgcatggcagtgccctgttccaacgtggactcacccaagtg
atgtcagtcgtgacgctgggaacacccggtgaagcccaagagctagacgatctgcatcca
gacgaagagaaacggtacatgcatcactacaatatgccaccgtattcagtcggagaaaca
aaaccgatgcgatcgcctggtcggcgcgaaattgggcatggcgctttggcagaacgggcg
ttggttcctgtcattcctcctaaagagaaatttccctatgtgattcgggtggtttcagaa
gttctatcgtccaatggttcaacttcgatggggtcagtttgcggttccacgttggcgttg
atggatgccggggtgccgatcgaaaaaccagtgagtggtgcagcgatggggttgattaaa
gaaggagaggaagtgcgaattcttaccgacattcaaggtattgaagactttttgggcgac
atggacttcaaggtggccggtacggatgggggaatcactgccttgcagatggacatgaaa
attaccggactacccatgaacattgtgtccgatgccatcaatcaagcgcgtccggcgcga
atgcacatcctagaaaaaatgctggcggcaattgatcaaccccgcacggagttatctccc
tttgctccacgtctactcactatcaagattgatccagacttaattggcttagtgattggg
ccaggtggcaaaaccatcaaaggtattactgaacaaacaggagcaaaggttgatattgaa
gacgacggaactgtgacaatttcagccgtagacggcagtaaggccaaacaagcacgcggc
atcattgaaggcatgacccgcaaactgaatgcaggcgatgtttatgtggggcgcgtaacg
cggattattccgatcggggcgtttgtcgagttcttgcctggcaaagaaggaatgattcac
atctcgcaactggccgactatcgcgttggcaaagtggaagatgaagtagcgatcggcgat
gaagtgattgtgaaagtgcgagaaattgacagtcgcggtcgcattaacctcactcggctg
ggcattcatcctgatgaagctgcggcagcacgatcggcggtgacaacctag
DBGET
integrated database retrieval system
