KEGG   Thermocoleostomius sinensis: OXH18_19380
Entry
OXH18_19380       CDS       T09238                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
tsin  Thermocoleostomius sinensis
Pathway
tsin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tsin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OXH18_19380
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsin03019]
    OXH18_19380
Messenger RNA biogenesis [BR:tsin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     OXH18_19380
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RNase_J_C RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Arabino_trans_N
Other DBs
NCBI-ProteinID: WAL59315
UniProt: A0A9E9CAS9
LinkDB
Position
complement(4493540..4495294)
AA seq 584 aa
MSQNASSNSLKIIPLGGLHEIGKNTCVFEYNDEIVLLDAGLAFPTDGMHGIQVVLPDTSY
LRENRHKIKGMIVTHGHEDHIGGIPFHLKQFDIPVIYGPRLAMSLLQDKLEEAGVGDRTE
LRTVGPRDMVRVGSSFLVEYIRNTHSMADSFSVAIHTPVGVVIHTGDFKVDHTPVDGERF
DLQRLAEHGEKGVLCLISDSTNAEVPGFTPSERSVFPNLDRAIAQAPGRVFVTTFASSVH
RVNMILELAKKHKRVVSVLGRSMLNVIAHARNLGYIKCDDDLFVPLNMVNKLPDEQVLIL
STGSQGEPMAAMSRIARQEHRQVKIREGDTVIFSANPIPGNTIAVVNTIDKLMMQGAKVI
YGRDKGIHVSGHGSQEDQKLMLALTKPKFFLPVHGEHRMLVKHAETAQSMGVPAENMVVI
NNGDVVELTRDSIRVVDKVPSGIELVDAAHSGVVNERVLKERQHLAEEGVVTIAATLGWS
GELISKPQVHLRGVATNIDRAKLEATIAQTIELVVSSRWAELTQALDNLSELNWPRLQSD
IEMELRRLLRRELQNNPSLVFLLQTPIEPPVASGRRRSTAKVAS
NT seq 1755 nt   +upstreamnt  +downstreamnt
atgagtcaaaacgcttcctcaaattcattgaagattattcctctcggtgggcttcatgaa
attggaaaaaatacctgcgtctttgaatacaacgacgaaattgtgctgcttgatgcggga
ctggccttcccaaccgatggaatgcacggtatccaagttgttttacccgacacgagctac
ctgcgtgaaaatcgccacaaaatcaagggtatgattgtcacccacggtcatgaagaccat
attggcgggattccctttcatcttaagcagtttgatattccagtgatctatggcccgcgt
ctagccatgtcgctgttgcaagacaagttggaagaggccggtgtgggcgatcgaactgaa
ctgagaaccgttggccctcgcgatatggtgcgggttgggtcgtcgtttttagtggaatat
attcgcaatacccattcaatggctgatagcttttcagtggcgattcatacgcctgtgggg
gtagtgatccatacgggagactttaaggtcgatcacacccctgtggatggtgagcgcttt
gatttgcagcgattagccgaacacggcgagaaaggagtgttgtgcttaattagtgactca
accaatgcagaagtgcctggttttacaccatcagaacgatcggtctttccaaatctcgat
cgcgcgattgcccaagcaccagggcgagtttttgttacgacctttgcctcatcggtgcat
cgagtcaatatgattttggaattagccaagaagcacaagcgtgtggtttcggtgttggga
cgatcgatgttgaatgtgattgcccatgctcgcaatctgggctacatcaaatgcgatgat
gatctattcgtgccgctcaacatggttaataagttgcccgatgagcaagtgttaattctc
tcaacaggttctcagggggaaccgatggctgccatgtcacgcattgcccgccaagaacac
cggcaagtcaaaatccgtgagggcgatacggtgatcttttcagccaaccccattccaggt
aacaccatcgccgtagtgaatacgatcgacaagctcatgatgcagggcgccaaggtgatc
tatggccgcgataagggcattcacgtatccggacatggctcccaggaagatcaaaagctg
atgctggccctgaccaaacccaaattctttctccctgttcatggcgagcatcgcatgtta
gtgaaacatgccgagacagcccagagtatgggggttccggctgaaaatatggtggtgatt
aataacggggatgtggttgagctaacccgtgattcaattcgggttgttgataaagtccct
tctggaattgaattagtagatgcggctcattcgggagttgtaaatgaacgggtattgaaa
gaacggcaacatttggcagaggagggagttgtcactatagcagcgactttgggctggagc
ggtgaattaatatcgaagccccaggtacatctgcggggtgttgcaaccaatattgatcgg
gcaaaattagaggcgacgatcgcccaaacgattgaactggtagtcagtagtcgttgggca
gaactcacccaagcgcttgataacctgagtgagttgaattggccgaggctgcaatcggat
attgaaatggaactgcggcgactgctgcggcgggaattgcaaaacaatccatccctagtg
ttcttgttgcaaacccccatagaaccgcctgttgctagtggtcggcgacgatcgactgcc
aaagttgcctcctaa

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