Thermocoleostomius sinensis: OXH18_19670
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Entry
OXH18_19670 CDS
T09238
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
tsin
Thermocoleostomius sinensis
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsin03021
]
OXH18_19670
Transcription machinery [BR:
tsin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OXH18_19670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_r3
Sigma70_ECF
HTH_24
HTH_23
HTH_AsnC-type
HTH_8
HTH_Tnp_ISL3
LacI
HTH_3
HTH_Crp_2
KORA
Fe_dep_repress
HTH_17
HTH_30
HTH_38
HTH_10
ApoC-I
HTH_11
UPF0122
YPEB_N
AbiEi_4
TPM_phosphatase
Motif
Other DBs
NCBI-ProteinID:
WAL59370
UniProt:
A0A9E8ZDS7
LinkDB
All DBs
Position
4556094..4556879
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AA seq
261 aa
AA seq
DB search
MTATQSSLRSHSLELLIAYQQSPSVALRNKLVRLNAGLVRKIAHRVSYQCAEPYEDLEQI
GYLGLIRAIERFDPTQGCAFSSFAVPYIRGEMLHFLRDRGSSIKVPRRWQDMQKEGQKIR
AELAKQSGRPPQDDEIAARLGVCVHEWREIKMATKNRLPLSLDATVCQQVDSTITLGETL
PDVHYQHLQRLEEDRQQLQHALNQLESKTRAAIEFVFFSDLSRKEVAERIGVSPMTVTRR
IQRGLEQMVAFLQPQSLQTDP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgacggctactcaatcttctcttcgatcgcacagtctggaattgttaatcgcctatcaa
caatcaccgtctgttgcactgcgcaacaagttggtacggctcaacgccggtttagtccgt
aaaattgcccatcgtgtcagctatcaatgtgccgaaccatacgaagatctagaacagatt
ggttatttaggtctgattcgagccatcgagcgatttgaccccacccaagggtgcgccttc
agttccttcgccgtcccctacattcgcggtgaaatgctgcattttctacgagatcggggc
agttccatcaaagttccccggcgttggcaagatatgcagaaagaagggcaaaaaattcga
gccgaactggcaaaacagtccggccgtccacctcaagacgatgaaattgctgcgcgtttg
ggcgtttgtgtgcatgaatggcgcgaaattaagatggccactaaaaaccgactgccgctg
agcttagatgccacggtttgccagcaggttgattccaccattactcttggtgaaactcta
ccagacgtgcattatcaacatctccagcgcttagaagaagatcggcagcaactacagcac
gccctcaatcaactggaaagcaaaactagagccgcgatcgagtttgtgttcttcagcgac
ttgtcccgtaaggaagttgcagagcggatcggcgtcagtcctatgaccgtaacccgtcgt
attcaacgtggtctcgaacaaatggtggcatttctacaacctcagtcgttgcaaaccgat
ccctga
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