Thermocoleostomius sinensis: OXH18_21070
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Entry
OXH18_21070 CDS
T09238
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
tsin
Thermocoleostomius sinensis
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsin03032
]
OXH18_21070
03400 DNA repair and recombination proteins [BR:
tsin03400
]
OXH18_21070
Enzymes [BR:
tsin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
OXH18_21070
DNA replication proteins [BR:
tsin03032
]
Prokaryotic type
DNA Topoisomerases
OXH18_21070
DNA repair and recombination proteins [BR:
tsin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
OXH18_21070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WAL59636
UniProt:
A0A9E8ZJH6
LinkDB
All DBs
Position
complement(4885675..4886844)
Genome browser
AA seq
389 aa
AA seq
DB search
MRRKGYRPHKRQHRHRGRQTRLHQHIRSVIVSDPVEAAKAAGLRYVTDDKPGIQRQRRGK
SFIYIDVNGKRIRDPEEIQRINALAIPPAYRDVWICPLPNGHLQATGRDAKGRKQYRYHP
LWRTVRDQTKFTRLLIFSQSLPTIRQQLAQDLALRGLPKRKVLAAVVQIMELTRIRVGNE
EYARTNQSYGLTTLQDDHVAISGSTIRFSFRGKSGVEHDMKLTDRRLARIVKQCQEIPGQ
DLFQYVDEDGSYQTIGSADVNEYLREMTGEDFTAKDFRTWAGTVLVASHLMQVGSFTSQT
AAKKNITQAIKAVAAHLGNRPATCRKYYVHPAILDCYLNETLHQIMEVHLQTNVQEMHGL
RPEELAVVAVLEQRLMHEQLSLQEQKVAS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgaaaagggtatcggccacacaagcgtcaacatcggcatcgaggacgacagaca
cgcttgcatcagcacattcgatcggtcatcgtctctgatccggtagaagcagcgaaggca
gcaggtctacgctatgtgaccgacgataaaccgggcattcaacgacaacgacgtggtaaa
agctttatttacatcgatgtgaatggaaaacgaatccgtgatcccgaagaaattcagcgg
attaacgccttagctattcctcctgcttatcgagatgtttggatctgtcccttgccaaat
gggcacttgcaagcaacgggacgggacgccaagggacgtaagcaatatcgctatcaccca
ctgtggcgaacggtgcgcgaccaaaccaaatttacgcgtctgctaatttttagccaatcg
ttgcctacgattcgccaacaattggcacaagacctagcactacggggattgccaaaacga
aaagtgctagcggcagtggtgcaaatcatggagttaactcgcattcgagttggcaatgaa
gagtatgcccgtactaatcaatcctatggtttgacaacgctgcaagatgaccatgtggca
atttcaggctcaacaattcgtttttcctttcgtggcaagagcggagtggagcatgatatg
aagctcaccgatcgacggttggccagaattgttaagcaatgccaagagattccaggtcaa
gatttgtttcagtatgtggatgaagatggcagctatcagacgatcggttccgcggatgtc
aatgaatatctgcgcgaaatgactggagaagattttaccgccaaagacttccgcacctgg
gcaggaacggttctagttgcttcccatctaatgcaggtcggatcttttacctcccaaacc
gctgccaagaaaaacattacgcaagcaattaaagcagtggcagcgcatttgggcaatcgc
ccggcaacttgccgcaagtactatgtgcatcccgctattcttgattgctatctaaatgaa
accttgcatcagatcatggaggtacacttgcagacaaacgttcaggagatgcatggtttg
cgccctgaagagttagcagttgtggccgtccttgaacaacggttgatgcacgaacagtta
tcgttgcaggaacagaaagtcgccagttag
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