Thermocoleostomius sinensis: OXH18_24775
Help
Entry
OXH18_24775 CDS
T09238
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
tsin
Thermocoleostomius sinensis
Pathway
tsin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tsin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
OXH18_24775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsin03021
]
OXH18_24775
03400 DNA repair and recombination proteins [BR:
tsin03400
]
OXH18_24775
Enzymes [BR:
tsin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
OXH18_24775
Transcription machinery [BR:
tsin03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
OXH18_24775
DNA repair and recombination proteins [BR:
tsin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
OXH18_24775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
ACBP4_C
Motif
Other DBs
NCBI-ProteinID:
WAL60339
UniProt:
A0A9E8ZBT1
LinkDB
All DBs
Position
complement(5720488..5722362)
Genome browser
AA seq
624 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPDRIRQWGERTLPNGMVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMSILLDMPLRDVEQIVYFNSYVVLNPGNAENLSYKQLLTEDQWIEIEDQLYSEDSQL
IGVEVGIGAEALQQLLQDLDLEKEAEVLREDIANSKGQKRAKLIKRLRVIDNFIATQSKP
DWMILEVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPPLKIHQCGLPKEMAIELFQPFVIHRLIKQGLVNNIKAAKKMIQRNDAQIWDVLEE
VIDGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQIHPLVCTAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNVLSPATGRPIITPSQDMVLGCYYLTAENPDATKGAGRYFANLEDA
IIAYDQGQVDIHSFIWVRFDGEVESDEPDNEPIEVQTFDDGMVTKLYKYRRVREDANGNL
ISQYIKTTPGRIIYNRTVYDALMT
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctagaacagcgatttgactatgtcaagattggtctggcctctcccgatcgc
attcgtcagtggggagagcggacgttgccaaatggcatggtggtgggtgaagtcaccaaa
cctgaaaccattaactaccggacattgaagccggaaatggatgggttattttgtgagcgt
atttttggcccagccaaggattgggaatgtcactgtggtaagtataagcgggtacgccat
cggggcattgtttgcgaacgctgtggcgtggaagtcactgagtctcgcgtgcgccgccat
cgcatgggttatatcaagctagcggctcccgttgcccatgtttggtatctaaaaggcatt
cccagttatatgtccattctattggacatgccattaagggatgtggaacagattgtctat
ttcaactcctatgtagtgcttaatccgggtaatgccgagaatcttagctataaacaactg
ctgaccgaagatcagtggattgagattgaagatcagctatacagcgaggattcgcaactc
attggggttgaagttggcatcggtgctgaagcgctgcaacaacttttgcaagatctcgat
ttagaaaaagaagccgaagttctgcgggaagacattgctaactctaaaggacagaagcga
gcgaagttgattaagcgactgcgggtgattgataacttcattgccacacagtcaaagcca
gattggatgattctggaagtgatccccgtgattccaccagatttgcgcccaatggtgcag
ctagatgggggtcgctttgctacctcggatctcaacgatctctatcggcgcgtgatcaac
cgtaacaatcgcttggcacgactgcaagaaattctggccccagaaatcattgtccggaat
gagaagcggatgctgcaagaagcggtagatgccttgattgataacggtcgtcggggtcgg
actgtggttggagctaacaatcgcccgctgaaatccttgtcggacattattgaaggcaag
caaggtcgattccggcaaaacctactgggtaagcgggtagactattccggtcgttcggtg
attgtggtgggacctcccttaaagatccaccagtgcggtctgcccaaggaaatggcgatc
gaactgtttcaacccttcgtcatccatcgtttgatcaagcagggcttggtgaataacatc
aaggccgctaaaaaaatgattcaacgcaacgatgcccaaatttgggatgtattagaggag
gtgattgacggacacccggtgatgttgaaccgagcaccaaccctacaccgcttgggcatt
caggcctttgaaccgattctagtagaaggtcgcgccatccaaattcacccattggtgtgt
accgcattcaacgccgattttgacggtgatcagatggcggtgcatgtgccgctgtcgttg
gaagcccaagccgaggcccgcttgctgatgctggcatcaaacaatgtcctgtctcccgct
actggacgccccatcatcactccgagtcaagacatggtgttgggctgttattatcttaca
gccgaaaatcctgatgcgacgaagggagccgggcgctattttgccaacctagaagacgcc
atcattgcctatgaccaagggcaagtagatattcattcctttatttgggtgcgatttgac
ggcgaggtggaaagcgatgaaccagataacgagccgatcgaagtgcaaaccttcgacgat
ggtatggtgacaaagctctacaaatatcgtcgagtgcgggaagatgccaacggcaacctt
atctcccaatacatcaaaacaacacccggtcgcatcatttacaaccggaccgtttacgat
gccttgatgacttag
DBGET
integrated database retrieval system
