Candidatus Thiothrix sulfatifontis: L3K52_01150
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Entry
L3K52_01150 CDS
T09924
Name
(GenBank) YcaO-like family protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsj03009
]
L3K52_01150
Ribosome biogenesis [BR:
tsj03009
]
Prokaryotic type
ribosomal protein modification factors
L3K52_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
UOG92355
LinkDB
All DBs
Position
complement(221529..223256)
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AA seq
575 aa
AA seq
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MPAQTFIPGKDAALEASIAVMQDKLQRLGFHIEEASWLNPIANVWSVHIRDRDCPLLFTN
GKGASEKAALASALGEYFERLSTNYFWADFYLGKTIADSNFVHHPAEKWFALDDSGNLPA
GLLDEDTLSFYDPETSLDAIKLVDINSGNEERGVCALPYVRQRDGETVWFPVNVIGNLYV
SNGMSAGNTATEARTQALSEIFERHIKFRIIAEGICLPDVPEAVIARYPHIQAGIAELRA
AGFGILVKDASLGGQYPVMCVTLLNPDDQGVYASFGAHPRFEVALERSLTELLQGRALDR
LAGFSEPSFELDDVASPQNLETHFIDSSGPLHWDFLWNEPDYEFVDWNFSGTTEEECQHL
MERIHADDYDVYIMDFEHLGVYACRIIVPEMSEIYQVEDLEWDNNSTGNAVREAILHLPD
LEDEECTELFDTIEELGLDDHQPVAALIGLAPDAGSLWADLRVGELKTLLALAMDDEDAI
REGCQWIRHFEQINDERRRVYRCIESLLDMDDVAGYMPNVGLLYGETALQQAQALLDGSV
RFWGITAPTLELHGCDTHQRLLTAYRKVYPTLAAL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacaaacctttattccgggcaaagatgccgcactggaagcttctattgccgtg
atgcaggacaagctacagcgccttggtttccacatcgaggaagcctcttggctgaacccg
attgccaatgtgtggtcggttcacatccgcgatcgtgattgcccgctgctgttcaccaat
ggcaaaggcgcatcggagaaagcggcgctggccagtgctttgggcgaatatttcgagcgc
cttagcaccaattatttctgggcggatttctatctgggcaagaccattgccgacagcaat
tttgtgcatcaccctgcggaaaaatggttcgccttggacgattccggcaatttacccgcc
ggtttgttggatgaagataccttgagtttttacgaccccgaaaccagtttggatgcgatc
aaattagtcgatattaattccggcaacgaagagcgtggcgtttgtgccttgccctacgtg
cgccagcgtgacggggaaacggtatggtttccggtcaatgtcatcggtaatttgtacgtc
agcaatggcatgtcggcaggcaataccgccacggaagcgcgtactcaagccttatcagaa
attttcgagcgccacatcaagttccgcattattgcggaaggaatctgtctgccggatgta
ccggaggcggttattgcgcgttatccgcatattcaggccggtattgcggaattacgtgcc
gccggttttgggattttggtgaaagatgcatcattaggcgggcaatacccggtgatgtgc
gtgaccttgctgaacccggacgatcagggcgtgtatgccagttttggggcgcatccgcgt
tttgaagtggcgttggaacgctctctcactgaactcttgcagggcagggcgttggatcgc
ttggcgggtttttctgagccgagttttgagctggacgatgtggcttccccgcaaaatctg
gaaacgcatttcattgattccagcggcccgctgcattgggattttttgtggaatgaaccc
gattacgagttcgtcgattggaatttcagtggcacgaccgaggaagagtgccagcatttg
atggagcgcatccacgcggatgattatgatgtttacatcatggattttgagcatttgggc
gtgtatgcctgccgcatcattgtgccggaaatgtcggaaatttatcaggtcgaagatctg
gagtgggacaataacagcaccggcaatgcggtgcgcgaggcgattctgcatttaccggat
ttggaagatgaggaatgcaccgagctattcgataccatcgaagaattgggtttggatgat
caccagccggtggctgccttgattgggttagcgccggatgcgggttcgctgtgggcggat
ttacgggtcggcgagttgaaaaccttgctggcattggcgatggatgacgaagacgcgatt
cgggaaggttgccagtggattcgccatttcgagcaaatcaatgacgagcgtcgccgcgtg
taccgttgcatcgaatccttgttggatatggatgatgtggcaggttatatgccgaatgtg
ggtttattgtacggtgaaaccgcgctgcaacaggcgcaagccttgctggatggcagtgta
cgcttctggggcattaccgctcccacgctggaattgcacggttgtgacacgcaccagcgt
ttactgacggcataccgcaaggtttatccaacattggcagcgctgtaa
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