KEGG   Candidatus Thiothrix sulfatifontis: L3K52_02040
Entry
L3K52_02040       CDS       T09924                                 
Name
(GenBank) ribonucleoside-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
tsj  Candidatus Thiothrix sulfatifontis
Pathway
tsj00230  Purine metabolism
tsj00240  Pyrimidine metabolism
tsj01100  Metabolic pathways
tsj01232  Nucleotide metabolism
Module
tsj_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
tsj_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:tsj00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    L3K52_02040
   00240 Pyrimidine metabolism
    L3K52_02040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tsj03400]
    L3K52_02040
Enzymes [BR:tsj01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     L3K52_02040
DNA repair and recombination proteins [BR:tsj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    L3K52_02040
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone LAGLIDADG_3 Intein_splicing Hint_2
Other DBs
NCBI-ProteinID: UOG93952
LinkDB
Position
complement(396470..400405)
AA seq 1311 aa
MTLPVSNAHSFASKVIRRNGQVTDFDGSKIQVAMTKAFLDVEGSNAAGSARIHDTVRKLT
AQVVDALQRRTPEAGMVHIEDIQDQVELALMRAGEHKVARSYVLYRAERARLRAEKESKT
NKKGKKVDSIIHVKAASGELKPLDEERLRKIIAEAVDGLEGVSAEQVMTATMRNLYDGIS
EKEVATALIISTRVMIDREPNYSQAAARMLMDSLRREALSFIEGQHTEATQQEMTTLYPE
VLKKTIRVGVTVERLADDLGRYDLAKLGAALKPERDLQFTYLGLQTLYDRYFLHHDGVRF
ELPQVFFMRVAMGLAINEVEREDRAIEFYNLLSSFDFMSSTPTLFNSGTLRPQLSSCYLT
TVPDHLEGIYDAIKDNALLSKYAGGLGNDWSRVRGMGAHIKGTNGKSQGVVPFLKVANDT
AVAVNQGGKRRGAVCAYLETWHIDIEDFLELRKNTGDERRRTHDMNSANWIPDLFMKRVA
AEADWTLFSPDEASDLHDLTGKAFELRYKEYEAKIERGEIKLFRKLPAMQLWRKMLGMIF
ETGHPWITFKDPCNIRYSNQHTGVVHSSNLCTEIMLHTTDDEIAVCFPAGTQVLTRDGQM
PIEDCDGREIFVPFDGQLQRQSRFLQARLLVQGEKPVYELVTKSGIVIEATDDHPFLVQM
PVDHDKPKVYQWKKLKELQAGDFIASPSTEPVYAEIGQQDTDFTAAGWMLGDGWMSTSYG
VCFGPHEQEAQQFVLPIINKWHQASELGNNTPHGYAPTPYTQPNGVVNWHSQRGGFIRYV
EQRFGFVRAKGGTKHIGSPIKVAEPNQIASFLSGLFSADGCVITDDRKIKGGVTVSLSSA
SIDLLRDVQLLLKPFGVHGRIRGGEVRGREGLWQGQYEIKGAESILNFSQFIGFSLTPAK
HTKLVDSLQRLSTKAAFQHSAVVSIVPKGIKPVFDLALAEDHNFLANGLVVHNCNLGSVN
LTAHVNDGKLDVAKLERTVTTAMRMLDNVIDYNYYSVPQARKSNLRHRPVGMGIMGFQDA
LYKMNLAYATTEAVEFADQSMEAVSYFAIRASSNLAAERGKYPSYNGSLWSKGILPIDSL
ELLGEERGEYFIVDHTQTLDWDALRNQVKAQGMRNSNVMAIAPTATISNICGVSQSIEPT
YQNLFVKSNLSGEFTVINPYLVQDLKALGMWDEVMINDLKYFDGSLQPLDRVPDALKAKY
ATAFEIDARWLIEAASRRQKWIDQGQSLNLYMKEPNGTKLDNLYKLAWVRGLKTTYYLRT
LGATGAEKTSSDDSSAANSVAGIKRAANLVSVGSEAPKACSLLDPECEACQ
NT seq 3936 nt   +upstreamnt  +downstreamnt
atgacactgccggtgtccaatgcccattcatttgccagcaaagtgattcgccgcaacggt
caagtgacggattttgacggcagcaaaattcaggtggcgatgaccaaggcttttttagac
gtggaaggcagcaatgcagcagggtcggcacgtattcacgacacggtacgcaaattgacc
gcgcaagttgtcgatgctttgcagcgccgcacacctgaagctggcatggtgcatatcgaa
gacattcaggatcaagtggagctggcgttaatgcgggcaggtgaacacaaagtggcgcgt
agttacgtgctgtaccgtgccgaacgcgcgcgattgcgtgctgaaaaagagtcgaaaacc
aataagaaaggcaaaaaagttgacagcattattcacgtcaaagccgcatccggcgagctg
aagccgttggatgaagagcgtttgcgcaagattatcgcggaagccgtcgacggtttggaa
ggggtcagtgccgaacaggtgatgacggccaccatgcgcaatttgtacgatggcatttcc
gaaaaagaagttgccaccgcgttgatcatcagcacccgcgtgatgattgaccgcgaaccg
aactattcgcaagcggcggcacgaatgctgatggacagcttgcgccgcgaagccttgagt
ttcatcgaaggtcagcacactgaagccacgcagcaggaaatgaccacgctgtaccctgaa
gtgttgaaaaaaactattcgggtcggggtgactgttgagcgcttggcggatgatttgggg
cgttatgatctggcgaaattgggcgcggcgcttaagccggagcgtgatttgcagttcact
tacctcggtttgcaaacgctgtatgaccgctatttcctgcatcacgacggggtacgtttt
gagttgccgcaggtatttttcatgcgcgtggcaatgggcttggcgattaacgaagtcgag
cgcgaagaccgcgcgattgagttttataacctgctgtccagctttgatttcatgagcagt
acgccgacattgtttaattctgggacattgcgtccgcagttgtcgtcttgctacctgact
accgtgcccgaccatttggaagggatttacgacgcgattaaagacaatgctttgctgtcg
aaatacgcgggcggtttgggtaatgactggtcacgggtgcgcggcatgggggcgcatatc
aaaggcacgaatggcaaatcgcaaggggttgtgccgtttttgaaggtggcgaatgatacg
gcggtagcggtgaatcagggtggaaaacgtcgcggcgctgtttgtgcttatcttgaaact
tggcacattgacatcgaagattttctggagttacgtaagaacacaggggatgagcgtcgt
cgcacccatgatatgaatagtgcaaattggattcctgatttatttatgaagcgcgtggcg
gctgaagcagattggacattgttttcaccagatgaggcatctgatttgcatgatctgaca
ggtaaagcatttgaattacgctacaaggaatatgaagctaaaatcgagcgtggcgaaatt
aaactattccgcaaactacctgctatgcagttatggcgtaaaatgttggggatgattttt
gaaactggacatccgtggattacgttcaaagatccatgcaatatccgttacagtaatcaa
catacgggagttgtacatagctctaatttgtgtacagaaataatgctgcatacgacggat
gatgaaattgccgtttgttttccagcaggcacacaagttttaacccgcgatggacaaatg
ccaattgaggattgtgatgggcgcgagatatttgttccatttgatgggcaacttcaacgg
caatcccgttttctacaagcacgtttgttggtgcagggtgagaagccagtttatgaactt
gtgactaaaagcggcattgtgattgaggcgacggatgatcatcctttccttgtgcaaatg
ccagttgatcatgataagccaaaagtctatcagtggaaaaaactgaaagaattgcaggcg
ggtgattttattgcttcgccaagtactgagcctgtttatgctgaaatcggtcagcaggac
actgatttcaccgctgccggttggatgttgggtgatgggtggatgtctaccagttacggt
gtctgttttggtcctcatgaacaagaggcgcagcaatttgttttacctatcattaacaaa
tggcatcaggcttctgagttaggtaataacacgcctcacggatatgcaccaacaccttat
acacaaccaaatggtgtcgtgaattggcatagtcaacggggaggttttattcgttatgtg
gagcagcgttttggttttgtacgggcaaaaggcggtactaagcacattggctctccgatt
aaagtagctgaaccgaaccaaattgctagtttcctctctggcttattctcggctgatggt
tgtgttattaccgatgatcgtaaaattaaaggtggtgttactgtgtcgctctcctcagcc
agcattgatttattgcgtgatgtgcagttattactgaagccattcggtgtacatggacgc
attcgtggtggtgaagtgcgtgggcgggaaggtctctggcaggggcaatatgaaattaag
ggcgctgagtctattttgaatttttcccaatttattggttttagtttaacgccagccaaa
catactaaattggtcgatagtttacagcggctttctactaaggcagcttttcagcatagt
gctgttgtgagtattgtgccgaaaggaattaaacctgtctttgatttagctttagccgaa
gatcacaatttcttggctaatggtttagtagtacataattgcaatcttggctcagtcaac
ctgactgcgcacgtcaatgacggcaagctggatgtggcaaaactggaacgcaccgtgacc
actgcgatgcggatgctggataacgtgattgactacaattactacagcgtgccgcaagcg
cgaaaatccaacctgcgccaccgtccggtcggcatgggcatcatgggtttccaagacgcg
ctgtacaaaatgaacctcgcttacgccactaccgaagcggtcgaattcgccgaccaaagc
atggaagcggtgtcgtatttcgcgattcgtgcctccagcaacctcgcggcagagcgcggc
aaatatcccagttacaacggctcgctgtggagcaaaggcattctgcccatcgactcgctg
gaattgctgggcgaagaacgcggcgaatatttcatcgttgaccacacccaaacgttggat
tgggatgcattgcgcaaccaagtcaaagcccaaggaatgcgcaattccaacgtgatggcg
attgcgccgaccgcgaccatttccaacatttgcggcgtgtcgcagtccatcgagccgact
taccagaacctgttcgtcaaatccaatttgtcgggcgaattcaccgtcatcaacccgtat
ctggtgcaggatttgaaagcactcggcatgtgggatgaggtgatgatcaacgacctcaaa
tacttcgacggctcgttgcaaccgctggatcgcgtgccggatgcgctcaaggccaagtac
gccaccgcgtttgaaatcgacgcccgttggttgatcgaagccgccagccgtcgccagaaa
tggattgatcaggggcaatcgctcaacctgtacatgaaagagccgaatggtacgaagctg
gataatttgtacaaactggcgtgggtgcgtggactgaagaccacgtattacttgcgtact
ttgggggcgacaggcgcggaaaagaccagctcggatgattcttcggcggcgaatagcgtg
gcggggattaagcgggcggcgaatttggtatcggttgggtcagaagcgccgaaggcttgt
tcgttgcttgatccagagtgcgaagcttgccagtaa

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