Candidatus Thiothrix sulfatifontis: L3K52_02290
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Entry
L3K52_02290 CDS
T09924
Symbol
ruvC
Name
(GenBank) crossover junction endodeoxyribonuclease RuvC
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L3K52_02290 (ruvC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsj03400
]
L3K52_02290 (ruvC)
Enzymes [BR:
tsj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
L3K52_02290 (ruvC)
DNA repair and recombination proteins [BR:
tsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L3K52_02290 (ruvC)
RecFOR pathway proteins
L3K52_02290 (ruvC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
UOG92576
LinkDB
All DBs
Position
complement(455061..455564)
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AA seq
167 aa
AA seq
DB search
MTTRRILGIDPGSRITGIGIIDTDGRRNQHVFSTCLRLGDASFPERLGTIFSEITRIIRE
YQPLEMAIESVFVSNNPASALKLGQARGAAICAGVIAGLPVAEYSPKEVKQATVGKGGAD
KAQVQHMVKLLLSLQGRLQVDTADALAVALCHAHASHLQQRLRSTVA
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacccgccggattctaggcattgaccccggttcgcggattaccggcatcgggatt
atcgacacggatgggcgccgcaatcagcacgttttcagcacctgtttgcgcttaggcgat
gcgtcgtttcccgaacggctagggacgattttcagcgaaatcacccgcattattcgcgaa
taccagccgcttgaaatggcgattgaaagcgtgttcgtctccaataaccccgcgtcggca
ctcaaattggggcaagcgcggggtgcggcgatttgcgcgggggtgattgccggtttgccg
gtcgccgaatacagcccgaaagaagtcaaacaagccaccgtcggcaaaggcggcgcggat
aaagcgcaagtgcaacacatggtcaagctgctgctcagtttgcaagggcgtttgcaggtc
gatacggcagatgcgctggcggtggcattgtgccatgctcatgcgagccatttgcaacaa
cgcctgaggagtaccgtagcatga
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