Candidatus Thiothrix sulfatifontis: L3K52_02885
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Entry
L3K52_02885 CDS
T09924
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L3K52_02885 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsj03400
]
L3K52_02885 (recF)
DNA repair and recombination proteins [BR:
tsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
L3K52_02885 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
DUF2813
AAA_13
AAA_29
AAA_27
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
UOG92684
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Position
complement(562237..563334)
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AA seq
365 aa
AA seq
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MWLSRVSVEHCRVVLRAELALAERVNVLYGDNASGKSSVLEALSVLSRGRSFRTPRIAEL
ISRGETELTVAAIVENGLSGARYPLGISKSVADTRIRINHADVPQQAELSSHVPLTLIHP
GSVELVTGSPTARRAFLDWIAFYRFADFNTAWRQYQRVLKQRNTCLRDPRQRQALPPWTQ
QLISLQPVLYRYRVNALSALLEALQHTHELLAASGTPQLHLSSGFPQGIAVEDETALHTF
FREKAEQELKQGFSLYGAHRADLHILLDGIPAVRVASRGQLKILAVSLLLAQSHAIAESG
TKRGIIAIDDLAAELDEQNQQALYNTLHTTQQQLLITGTHHQPLKNWVADAKVFHVKHGQ
VFASA
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtggctaagccgcgtcagcgttgagcattgccgcgtggttttgcgtgcggagctggct
ttggcagaacgggtcaatgtgctgtacggcgataatgcttcaggcaaatccagcgtgctg
gaagccttgagtgtgttgtcacgcgggcgttcgtttcgtaccccacgtattgccgaatta
attagccggggggaaaccgaactcaccgtggcagccattgtggaaaacggtttatccggg
gcgcgttaccctttgggcatcagcaaaagtgtggcggatacccgcattcgtatcaaccat
gctgatgtgccgcagcaagccgaactcagcagccatgttcccctcaccctgattcacccc
ggttcggtggaactggtcactggcagtccgacagcgcggcgggcgtttctcgactggatt
gcgttttaccgttttgccgatttcaatactgcatggcggcagtatcagcgggtattgaag
cagcgcaatacctgtttgcgtgatccgcgccagcgtcaggcgttgccgccatggacgcaa
caacttatcagcttgcagcccgtgctgtaccgataccgcgtgaacgctctcagtgcctta
ctggaagccttgcagcatacccacgaactgttagcggcgtcaggcacgccgcaactgcat
ctcagcagcggtttcccgcaaggtattgcagtggaagacgaaactgccctgcatactttt
tttcgtgagaaagccgaacaggaactcaagcagggtttcagtctctacggtgcgcatcgg
gcggatttacacattctgttggatgggattccggcggtgcgggttgcgtcacgcgggcaa
ctgaaaatactcgcggtgagtttattattggcgcaaagccatgccattgccgagagcggt
acaaaacgcggtataatcgccatcgacgacttggcagcagaattggatgagcaaaatcag
caagcgttatacaatacgctgcacacgacacaacaacagttgctgattaccggcacacat
caccaacctttgaagaactgggtggcagatgccaaggtgtttcacgtgaaacacgggcaa
gtgtttgccagcgcgtag
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