Candidatus Thiothrix sulfatifontis: L3K52_04940
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Entry
L3K52_04940 CDS
T09924
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsj01011
]
L3K52_04940
Enzymes [BR:
tsj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
L3K52_04940
Peptidoglycan biosynthesis and degradation proteins [BR:
tsj01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
L3K52_04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
UvrD_C
PurL_C
Motif
Other DBs
NCBI-ProteinID:
UOG93079
LinkDB
All DBs
Position
complement(970905..972863)
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AA seq
652 aa
AA seq
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MSRLLLTLMCCALSSTPPALAESPENPPMQRQLFQQTYSDLQAGNPDTFAALPAAMRQYP
LYPWLEYTDLKQRLDTLPDATVLDFIRRNPDSLMADALNIQLAKRLAAKQDWQTLLATIP
ATLDDTDTQCYRTQALAAVGQKDAALELGKKTWMSISKSLSDACIPVTDLLRRHVMLSTN
DYWERIRAALDKNQTTLATQLAAALPPEAQMAVNTWIQIRETPAEALPVAMQQPDNAYLR
DAIAFGLERLAKKESQQAEALWQTARQTLKFTPEESAKVESALGIQQALRHDPAALKRLA
AIPAAQRTQDANLWLARTAARQGEWKTLLDATQHLQFEHERDAAGWHYWQARALEQTGKK
AKATTLYTQIAPQATFYGFLAADRLGQTYTSLKTPAVDRSQRVAGLQKVAAIQRAFEWFA
LGNREQGRKEWFRALKQMDKEGALAAADLAIRSNDHNLAIWTVARAKEWDETHLRFPVVH
TDLVMAQARNQGIQPAWVMGVIRRESAFDATVESSAKALGLMQLIPPTAKAVGTKLGLNI
KGRDDILPPATNIQLGSAYLREMLGKFSGNYAQATAAYNAGPGRPPQWTPQQLINADQWI
ESIPFTETREYVQAVMGYTTIYDEKLNPGKGRRLSERLQPIAPHAPKPTPSP
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgagccgactgcttctcacgttgatgtgttgcgcgttatccagcaccccgcccgcccta
gcggagtcgccggaaaacccaccgatgcagcgccaattatttcagcaaacttacagcgac
ctgcaagccggaaatcctgacacgtttgccgcacttcccgctgcgatgcgccaatacccg
ctttacccttggctggaatacaccgatcttaagcagcgcctcgacaccttgcccgatgcc
acggtactggattttatccgccgcaatcctgattcgctgatggctgatgcgctcaatata
caactcgccaaacgccttgccgccaaacaagactggcaaaccctgcttgccaccatcccc
gccaccttggatgacaccgacacccaatgctaccgcacccaagcactcgctgccgtgggg
caaaaagacgccgcactggaactgggtaaaaaaacttggatgagcatcagcaaatcgctt
tcagacgcttgcatccccgtcaccgacttattgcgccgccacgttatgctttccaccaac
gattattgggaacgtattcgagccgcactcgacaaaaatcaaaccacgcttgcgactcaa
ctggcagcggctttaccacctgaagcgcaaatggcggtcaatacctggatacaaatccgc
gaaacacccgccgaagcgctccccgtcgccatgcagcaaccggataacgcttacctgcgt
gatgcgattgctttcgggctggaacgccttgccaaaaaagaatcccagcaagccgaagcc
ctctggcaaaccgctcgccaaaccctaaaatttacccccgaagaaagcgctaaagtcgaa
agcgccttgggaatacaacaagccctgcgccatgaccccgccgccttgaaacgccttgcc
gccatccctgccgcacagcgcacccaagacgcgaatttgtggctggcacgcaccgccgcg
cgtcaaggtgagtggaaaaccttgctggatgccacccaacacctgcaattcgagcacgaa
cgtgacgccgccggttggcactattggcaagcccgcgccctcgaacaaaccggcaaaaaa
gccaaagccaccacgctctacacccaaattgccccgcaagccacgttttacgggtttttg
gctgccgaccgtttagggcaaacctacaccagtcttaaaactccagccgttgaccgcagc
cagcgcgtcgccggattgcaaaaagtcgccgccatccaacgcgctttcgagtggtttgcc
ctgggcaatcgcgaacaaggccgcaaagaatggtttcgcgccctcaaacaaatggataaa
gaaggtgctcttgctgccgctgatctcgccatccgcagcaatgaccacaacctcgccatt
tggacagttgcccgcgccaaagaatgggatgaaacccacctgcgctttcccgtggtacac
accgatctggtcatggcgcaagcccgcaaccaaggcattcaacccgcttgggtcatgggg
gtcattcgccgtgaaagtgcctttgatgccacggtcgaatccagcgccaaagcccttggc
ctcatgcaactgattccgcccacggcaaaagcggtcggtaccaaactgggcttaaacatc
aaggggcgcgacgatatactgccgcccgccaccaatattcagctaggcagcgcgtattta
cgtgaaatgctcggcaaattctccggcaattacgcgcaagccaccgccgcctacaacgcc
gggcccggtcgccccccgcaatggacaccgcaacaactgattaatgccgaccaatggatc
gaaagcatccccttcaccgaaacccgcgaatacgtgcaagccgtcatgggctacaccaca
atttacgatgaaaaactgaatccgggtaaaggtcgtcgcctgtccgaacgtttacaaccg
atagcaccccatgcacccaaaccaacgcccagcccctaa
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