Candidatus Thiothrix sulfatifontis: L3K52_05885
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Entry
L3K52_05885 CDS
T09924
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj00300
Lysine biosynthesis
tsj00470
D-Amino acid metabolism
tsj01100
Metabolic pathways
tsj01110
Biosynthesis of secondary metabolites
tsj01120
Microbial metabolism in diverse environments
tsj01230
Biosynthesis of amino acids
Module
tsj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L3K52_05885 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
L3K52_05885 (lysA)
Enzymes [BR:
tsj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
L3K52_05885 (lysA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NBD_C
Motif
Other DBs
NCBI-ProteinID:
UOG93261
LinkDB
All DBs
Position
1165101..1166351
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AA seq
416 aa
AA seq
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MDHFEYRNGQLHAENVAVTDIARAHGTPCYVYSRATLERHWHAFNDAFGAQPHLVCYAVK
ANSNLAILNLFARLGSGFDIVSGGELERVLRAGGDPSKVVFSGLGKKAAEIRKALEVGIR
CFNIESEAELDRINTVAGEMGKVASISLRVNPDVDAQTHPYISTGLKENKFGIEIGRAEA
VYVKAATMPHLKVVGIDCHIGSQLLTLTPFMDALQRLLALAERLQAQGITIHHLDIGGGL
GVRYQEGQAAPSPADYMAQLFTDERLRQYEIFVEPGRAIAANAGILVTEVEFLKLSEYKN
FAIVDAAMNDLIRPALYSAWQEIIPVVPRPAGETTTYDVVGPVCETGDFLGKERDLNIQP
GDLLAVRSAGAYGFTMASNYNTRPRVAEIMVDGDTVHVVRTRETLDDLLRGEQVLP
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcattttgaataccgcaacgggcaactccacgccgaaaatgtcgccgtcactgac
attgcccgcgcccacggcacgccgtgctacgtctattcccgcgccacgttggaacgccat
tggcacgccttcaacgatgccttcggcgcacagccacacctcgtgtgctacgcggtcaaa
gcgaattccaacctcgccatccttaacctgtttgcccgcttaggctcagggttcgacatc
gtatccggcggcgaattggagcgggtgttacgcgcaggcggcgatcccagcaaagtggtg
ttttccggtcttggcaaaaaagccgctgaaatccgcaaggcgctagaagtcggcatccgc
tgcttcaatatcgaatccgaagccgaactcgatcgcattaacacggtagcgggtgaaatg
ggcaaagtggcctccatctcgttgcgcgtcaaccctgatgtggatgcacaaacccacccc
tacatttccaccggcttgaaagaaaacaagttcgggattgagatcggtcgcgccgaagcg
gtgtatgtgaaagccgccaccatgcctcacctgaaggtggtcggcatcgactgccacatc
ggttcgcaattgctgacgctcacgccgttcatggatgccctgcaacgcttgctggctttg
gcagaacgcttgcaagcgcaaggcattactattcaccacctcgacatcggcggcggtttg
ggcgtgcgttatcaggaaggacaggcagcgccttcccccgccgactacatggcgcaattg
ttcaccgacgaacgtttgcgtcagtacgaaattttcgtcgagccgggcagggcgattgcc
gcgaatgcaggcattttggtcacagaagtcgaattcctcaagctgtcggaatacaaaaat
ttcgccatcgtggatgccgcaatgaacgacctgatccgccccgctttatacagtgcttgg
caggaaatcattccggtcgtgccgcgcccagcgggtgaaaccacgacttacgacgtggtg
gggccggtgtgcgagacgggcgactttttgggtaaagagcgtgatttgaacattcagccg
ggggatttgctggcagtgcgttcggcgggggcttatggttttacgatggcttccaactac
aatacgcgcccgcgtgtggctgaaattatggtggatggtgacacggtacacgtggtgcgt
acccgcgaaactttggatgatttgttgcgtggtgaacaggtgttgccgtaa
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