Candidatus Thiothrix sulfatifontis: L3K52_06270
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Entry
L3K52_06270 CDS
T09924
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj00900
Terpenoid backbone biosynthesis
tsj01100
Metabolic pathways
tsj01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
L3K52_06270 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tsj01006
]
L3K52_06270 (ispA)
Enzymes [BR:
tsj01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
L3K52_06270 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
L3K52_06270 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
L3K52_06270 (ispA)
Prenyltransferases [BR:
tsj01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
L3K52_06270 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
eIF3m_C_helix
Motif
Other DBs
NCBI-ProteinID:
UOG93333
LinkDB
All DBs
Position
1227795..1228688
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AA seq
297 aa
AA seq
DB search
MLNVRNRLQAWQGRIESVLESVLPPATTHPAVLHQALRYSVLDGGKRMRPLLVYATGEAL
GIAPEHLDIPAAAVELIHVYSLVHDDLPAMDNDDLRRGKPTCHKAFDEPTAILVGDALQA
LAFQVLAAHPRMTASPAQRLRMIELLGQAAGSRGMVGGQALDLAAVGGTLTEIALENMHI
HKTGALIRASVLLAAYSVEALDAQRLQQLDHFAKCIGLAFQVQDDILDVESDTQTLGKIR
GADEAAGKPTYPSIIGLSASKTKLQDLYDEALDALVSFDESAHLLREIAEFTVKRIR
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatgtgcgtaaccgtttgcaagcttggcaggggcgtattgaatcggtgttggag
agtgtcttgccaccggcgacgacgcatccggcagtattacatcaagcgctgcgctattcg
gtgctggatggcggcaaacggatgcgcccgttgttggtgtatgccaccggggaagccttg
gggattgcgccggagcatttggatattccagcggctgcggtggagctgattcatgtgtat
tcactggtgcatgacgatttaccagcgatggataatgatgatttgcgtcggggtaaacca
acctgtcataaagcgttcgatgagccgaccgcgattttggtaggggatgctttgcaagcc
ttggcatttcaagtattggcggcacacccccggatgacagcttcacctgcgcaacgtttg
cggatgattgagctgctggggcaggcagcgggttctcgcggcatggtcggtgggcaagcg
cttgatttggcagccgtgggaggaaccctgaccgagatagcgttggaaaacatgcacatc
cacaaaaccggcgcattgatccgtgcgagcgtgctattggcggcgtatagtgtggaagca
ttggatgcgcagcgcttgcaacaattggatcattttgcgaaatgcatcggtttggcgttc
caagtgcaggacgatattttggatgtggaaagtgatacccagaccttgggtaaaatccgt
ggcgctgatgaggctgccggtaagccgacgtatccttccatcattggcttgtccgcatcc
aaaaccaagctacaagatttgtatgacgaagcgctggacgctttggtatccttcgatgaa
tcggcgcatttgttgcgtgaaattgccgagttcacggttaagcgcatacgataa
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