Candidatus Thiothrix sulfatifontis: L3K52_06965
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Entry
L3K52_06965 CDS
T09924
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsj03032
]
L3K52_06965
03036 Chromosome and associated proteins [BR:
tsj03036
]
L3K52_06965
03400 DNA repair and recombination proteins [BR:
tsj03400
]
L3K52_06965
DNA replication proteins [BR:
tsj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L3K52_06965
Chromosome and associated proteins [BR:
tsj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
L3K52_06965
DNA repair and recombination proteins [BR:
tsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
L3K52_06965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UOG93462
LinkDB
All DBs
Position
1353547..1353819
Genome browser
AA seq
90 aa
AA seq
DB search
MNKAELIDAVAEKSGLTKIDTDKAFKAFIEVISESMAKGDQVALVGFGTFLVRERQARSG
RNPRTGETISIAAAKIPSFKAGKALKDTVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagcagaattgattgatgcagtagcagagaagtccggtttgactaaaattgat
accgataaagcgttcaaggcatttattgaagtcatcagcgagtcgatggcaaaaggcgac
caagtggctctggttggctttggtacgttccttgtgcgtgagcgtcaggcacgttctggg
cgtaatccgcgtactggtgaaacaatttctatcgctgctgctaaaattccttcatttaag
gctggtaaagccctaaaagatactgtacagtag
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integrated database retrieval system
