Candidatus Thiothrix sulfatifontis: L3K52_07050
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Entry
L3K52_07050 CDS
T09924
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj03030
DNA replication
tsj03430
Mismatch repair
tsj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L3K52_07050 (dnaQ)
03430 Mismatch repair
L3K52_07050 (dnaQ)
03440 Homologous recombination
L3K52_07050 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsj03032
]
L3K52_07050 (dnaQ)
03400 DNA repair and recombination proteins [BR:
tsj03400
]
L3K52_07050 (dnaQ)
Enzymes [BR:
tsj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L3K52_07050 (dnaQ)
DNA replication proteins [BR:
tsj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L3K52_07050 (dnaQ)
DNA repair and recombination proteins [BR:
tsj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L3K52_07050 (dnaQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
DUF8679
Motif
Other DBs
NCBI-ProteinID:
UOG93476
LinkDB
All DBs
Position
1365428..1366147
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AA seq
239 aa
AA seq
DB search
MSRQIILDTETTGLEPKEGHRIIEIGCVEMLNRRLTGNNFHVYLQPDREIDAGAIEVHGI
TNDFLADKPRFEAIMDDFLAYVRGAELIIHNAPFDIGFLNHELRLVNPAHQPITDDCSVT
DTLRMARQLFPGQRASLDALCKRYEINNAHRTLHGALLDAEILADVYLAMTGGQVSLLLG
AEDGNRDGQQGGAVIRRVTADVSRLRVIPASEDELAAHAERIAAITKAGGKCLFAPPSV
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccaaattatcctcgatactgaaaccaccggccttgaaccgaaagaggggcac
cgcattatcgaaatcggttgcgtggaaatgctcaaccggcgcttgacggggaataatttc
cacgtttacttgcaaccggatcgcgaaattgatgcgggggcgattgaagttcacggcatc
accaatgattttctggcagataagccgcgttttgaagcgattatggatgattttctcgcg
tatgtgcgtggggctgagctaattatccacaatgcgccgtttgatattggtttccttaat
cacgaattgcgcttggtgaacccggcgcatcagccgatcacggatgattgcagcgtgacc
gatacgttgcggatggcacggcaattgttccccggtcaacgcgccagtttggatgcgttg
tgcaagcgttacgaaatcaataatgctcaccgcacgttgcatggcgcgttgctggatgcg
gagattttggcggatgtctacctagcaatgacgggcgggcaagtcagcttgttgctaggg
gcagaagatggcaatcgtgacggacaacaaggtggagcagtcattcggcgcgtgacggca
gacgtgagtcgcttgcgggtaattccggcaagtgaagatgaattggcggcacatgcggaa
cgtattgccgctatcacgaaggctgggggcaagtgtttatttgccccgccgtcggtttaa
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