KEGG   Candidatus Thiothrix sulfatifontis: L3K52_07130
Entry
L3K52_07130       CDS       T09924                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tsj  Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:tsj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tsj02048]
    L3K52_07130
Enzymes [BR:tsj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     L3K52_07130
Prokaryotic defense system [BR:tsj02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   L3K52_07130
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD RRP36
Other DBs
NCBI-ProteinID: UOG93490
LinkDB
Position
1377585..1380794
AA seq 1069 aa
MMSYEYSEDALVEAAAEEILLDLNWQVVTAWHKETFARMPDRSDGLLGRANRTEVILQRY
LMAALKQLNPDLPTAAYHSAIEQLKQADVGKKLADINKAKHALLTQGVEVSYQDAKGVLH
KKKLRVFNFQEPEKNHFLAVRQLVIKGELYEKRPDIIGFVNGIPLVFFELKAHHTDLHNG
YTENLTDYKGGKNHEGTIPALFHCNAFIILSNGTDARVGTLTSAFKFFQEWKRYEEDDAG
EVSLDTLLRGTCEKNRLLDLLENFLLFDGQGDDLAKIMAKNHQFLGVNKVLTQARTLDDL
KGKLGVFWHTQGSGKSYSMVFMCQKLLRKFGGSYTFLLVTDRSELENQLYDTFSGCGALP
SQLPKRGVRAKSREHLRELLADNHRYVFTLIHKFSFDPKQESVYPLITERANIIVISDEA
HRTQGGTFARNMRFSAIPNASYLGFTGTPLIDEEDEITKNIFGDYVSVYDFKKAIADNAT
LPLRYQNRGEKLHIENPQLDERMAAIINEEELDAAQLAKLKRAFARDYPVLTAEHRLKAI
ARDLVWHFNGRGYQGKAMFVALDKPTAVRMYDFIMGYWSEYVSELEQRINTAEDEQQAQK
LKRQLQRVQTTEVCVVVSPEQNELKTFADLGLEIKPHRQKMVERDLETEFKDDANPFRLA
IVCAMWITGFDAPCVSTVYLDKPIQGHTLMQTIARANRVYDDEKENGLIIDYGNVYQQLE
KAYAVYGEGGKGKKKPGDDHPVELLEAMESELSAAIVTVRDYLLAVGFELDNLIQAVSAV
KKLAALRQAREAVSLNETTRTQYEFAARQVFRKYNALCLEPLVKPYTPAFNAIEAIYAQL
NQKTKTADITAVIRQLQQEVNISVSTLDGAKEDDRFEDTYVDLSTLDFDKLRAAFAKSIQ
KNTVVFDLQQAIEQRLTQMLQANPTRLAFYMKYQAIIKAYNAGKDQQAVQQAFDKLSDFV
KNILSPETERAMRECLDEETLAIFDLLKKPELNLAERQQVKQVATETLATLKAEQLKIAR
WRESVQVTAQVRTLIDERLQWLPAAAYPDAELALKGHVVYQHVYSHSSM
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgatgagctacgaatattccgaagatgcactggtggaggctgccgccgaagaaatcctg
ttggatttaaactggcaagtcgtcaccgcatggcacaaggaaacgtttgctagaatgccc
gaccgcagcgacggtttactcggtcgcgctaaccgcaccgaagtgatcttgcaacgctat
ctcatggcagcccttaaacaactcaaccccgatcttcccactgccgcttatcacagtgcc
atcgaacaactcaaacaagccgacgtgggaaaaaaactggcggacattaacaaagccaag
cacgctttactgacgcaaggggtggaggtgagttatcaagatgcgaaaggcgtgttgcac
aagaaaaagctcagggtgtttaacttccaagaaccagagaaaaaccacttcctcgccgtg
cgccagctcgtcatcaagggcgaactctacgaaaagcgccccgatattattggctttgtg
aacggcattcccttggtgtttttcgagctgaaagcccatcacaccgatttacacaatggc
tacaccgagaatttgaccgactataaaggtggcaaaaatcacgaaggcacaattcccgcg
ttattccattgcaatgcgtttatcatcctcagtaatggcacggatgcacgggtcggcacg
ctgaccagcgcattcaaattctttcaagaatggaaacgttacgaagaagatgatgcaggc
gaagttagtcttgatactttgctacgcggtacgtgcgaaaaaaaccgtttgctggatttg
ctcgaaaattttctgttattcgacgggcagggcgatgatctcgcgaaaatcatggcgaaa
aaccaccagtttctcggcgtgaataaggtgctgactcaagcccgcacgcttgacgattta
aagggaaaactcggcgtgttttggcatacgcaagggtcgggcaagtcgtattcgatggtg
tttatgtgccagaaattactgcgcaagtttggcggtagttacacttttttgctggtcact
gaccgcagcgaattggaaaaccagttgtacgatacgttttcgggttgtggggcattgccg
agccaattaccgaaacggggcgtgcgtgccaaaagccgcgaacatttgcgcgagttgttg
gcagacaatcaccgctatgtgtttaccttgattcacaaattttcgtttgatccgaaacag
gaaagcgtttatccgctgattacagagcgtgccaatattatcgtgatttccgatgaagcc
caccgcacgcagggtggtacatttgctcgtaatatgcgctttagtgctattccgaatgcg
tcgtatctgggtttcaccggcacaccgctgattgatgaagaggatgaaattaccaagaat
attttcggtgattacgtgtcggtgtatgattttaaaaaggcgattgctgacaatgccacc
ttgcccttgcgttaccaaaacagaggcgagaagctgcatattgaaaacccccaactcgat
gagcgcatggcggcgattatcaacgaagaggagttggatgcggcgcaactcgccaaactc
aaacgtgcctttgcccgcgattatccggttttgacggcagaacaccgcttaaaagccatt
gcgcgggatttggtgtggcatttcaacgggcgtggttatcaaggcaaagccatgttcgtg
gcgttagacaaacccaccgctgtgcggatgtatgattttatcatgggctattggtcggaa
tacgtcagtgagttggaacagcgtatcaataccgctgaggatgagcagcaagcgcaaaaa
ctcaagcgtcaattacagcgagtccaaaccaccgaagtgtgtgtggtggtcagccctgaa
caaaacgagttaaagacgtttgctgacttggggctggagattaaaccgcaccgccagaaa
atggtggagcgtgatctggaaaccgaattcaaagacgacgctaacccgtttcgtttggcg
attgtgtgcgcgatgtggattaccggctttgatgcgccctgtgtgtcgacggtgtatttg
gataaaccgattcaagggcatactttgatgcaaaccattgcccgcgccaatcgtgtgtat
gacgatgaaaaagaaaacgggttgattatcgactacggcaatgtctaccaacagctcgaa
aaagcctatgccgtgtatggcgagggcggcaaaggcaagaaaaagccaggggacgatcat
cccgttgagctgttggaggcaatggaatccgaactcagtgccgccattgtgacggtgcgc
gattacttgctggcggtcggttttgaactggataatttgattcaggcggtcagtgccgta
aaaaaattggcggcattgcggcaagcccgcgaagcagtatccttaaatgaaaccacgcgc
acccaatacgaattcgcggcgcggcaggtgtttcgcaaatacaatgccttgtgtcttgag
ccattggtgaagccctacacgcctgcttttaatgcgattgaagccatttacgcccagctt
aaccagaaaaccaaaacggcggatattaccgctgttattcgccagcttcagcaagaagtg
aacatcagcgtgagtacgttggacggtgctaaagaagacgatcgctttgaagacacttac
gtggatttgagtacactcgattttgacaaattgcgggcagcgtttgctaaatccatccaa
aagaacaccgtggtatttgatctccagcaagccattgagcaacggcttacgcaaatgctg
caagcgaatccgacccgcttagcgttttacatgaagtaccaagcgattattaaagcctac
aacgcaggcaaagatcagcaggcggtgcaacaagcctttgataaattgagtgattttgta
aaaaacatcctcagcccagaaaccgagcgagccatgcgtgaatgtttggatgaggaaacg
ctggcgattttcgatctgttgaaaaaaccagaacttaatctcgcagaacgccagcaggtt
aaacaggtggcaacagaaaccttggcaaccttgaaagccgaacaactgaaaatagcgcgt
tggcgggaaagcgttcaagtgactgcccaagtccgcacgctgattgatgaacgcctgcaa
tggttgcctgccgccgcctaccctgatgcggaattagcgctgaaaggtcatgtggtttac
cagcatgtgtatagccactcttccatgtaa

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