Candidatus Thiothrix sulfatifontis: L3K52_07745
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Entry
L3K52_07745 CDS
T09924
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj02024
Quorum sensing
tsj03060
Protein export
tsj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
L3K52_07745 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
L3K52_07745 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L3K52_07745 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tsj02044
]
L3K52_07745 (ffh)
Enzymes [BR:
tsj01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
L3K52_07745 (ffh)
Secretion system [BR:
tsj02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
L3K52_07745 (ffh)
Eukaryotic Sec-SRP protein
L3K52_07745 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
CbiA
cobW
AAA_30
6PF2K
AAA_16
APS_kinase
PIF1
YqeC
T2SSE
AAA_33
AAA_24
ABC_tran
AAA_19
ATP_bind_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
UOG93612
LinkDB
All DBs
Position
1498512..1499894
Genome browser
AA seq
460 aa
AA seq
DB search
MFENLSERLSQTVKKLRGQARLTDDNIKDALRDVRMALLEADVALPVVREFTNRVRERAI
GQEVLESLSPGQALIKVVNDELVALMGKANETLSLNAQPPAVILMAGLQGAGKTTTVGKL
TRFLKERQNKSVMVASCDVYRPAAIKQLETIAGQTGGIFFPSENAQKPVDIAKAAVAQAK
LKYMDVLIIDTAGRLHVDAEMMAEIQAIHSAVNPVETLFVVDSMTGQDAANTAKAFGDAL
PLTGVVLTKADGDARGGAALSVRYITGKPIKFVGMGEKLDALEPFHPERMASRILGMGDV
LSLIEDAQRQVDHKKAAELAKKLNKGKSFDFEDLRDQMLQMEKMGGVAGLMDKLPGMGNL
PANVKEQGNDKEVRRMIAIINSMTLEERRNPDIIKASRKRRIAAGCGLQVQDVNRLMKQH
LQMSKMMKQFSKGGLRKLMTGMKGKLPMGGGFPPMGGFSG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgttcgagaatttaagtgaacgtctttcgcagacggtaaaaaaactacgcggtcaggca
cgtctgaccgacgacaatattaaagatgccctgcgtgatgtgcggatggcactcttagaa
gctgacgtggcgctgccggtggtgcgtgaattcaccaatcgggtgcgtgaacgggcgatt
gggcaagaggtattggaaagccttagccccggtcaagctttgatcaaggtggtcaacgat
gagttggttgcactcatgggcaaagccaacgaaacgctgtcgctgaatgcgcaaccacct
gctgttattttaatggcaggtttgcagggtgcgggtaaaaccaccaccgtcggcaaattg
acccgtttcttgaaagaacgccagaacaaatcggtgatggtggcgagttgtgacgtttac
cgcccagcggcgatcaaacagcttgaaaccattgcggggcagacgggcggaattttcttt
cccagtgaaaatgctcagaagccggtggacatcgctaaagccgctgtagcgcaggcaaaa
ctcaaatacatggatgtgctgatcattgatactgccggacgcttgcacgtcgacgcggag
atgatggcggaaatccaagctatccattccgctgtgaatccggtagaaacgctgtttgtg
gtggatagcatgaccgggcaggatgctgccaatactgctaaagcgtttggtgatgcattg
ccgctgacgggcgtggtgttgaccaaagcggatggcgacgcacgcggtggtgcggctttg
tcggtgcgctatatcacgggcaaaccgattaagtttgtggggatgggcgaaaagctggat
gcgttagagccgttccaccccgaacgcatggcctcgcgcattttgggcatgggtgatgtg
ctgagcttgattgaagatgcgcagcgtcaggttgatcataaaaaagccgcagaactcgcc
aaaaagcttaataagggcaaatcgttcgattttgaagatttgcgtgaccaaatgttacaa
atggaaaagatgggcggtgtggctggcttgatggacaagttgccgggcatggggaattta
cccgctaatgtcaaagagcagggcaacgataaagaagtgcgtcgcatgattgccatcatt
aattctatgacgctggaagagcgccgtaacccggatattattaaagcatcgcgcaagcgt
aggattgctgcgggttgcgggctacaggttcaggatgtaaatcgcttaatgaaacagcat
ttgcagatgagcaaaatgatgaagcagttttctaagggtggtttgcgcaaactgatgact
ggcatgaaaggcaagttgccgatgggcggtggtttcccacccatgggtggcttttccggg
tag
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