Candidatus Thiothrix sulfatifontis: L3K52_08440
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Entry
L3K52_08440 CDS
T09924
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj00550
Peptidoglycan biosynthesis
tsj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
L3K52_08440 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tsj01003
]
L3K52_08440 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
tsj01011
]
L3K52_08440 (mrcB)
Enzymes [BR:
tsj01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
L3K52_08440 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
L3K52_08440 (mrcB)
Glycosyltransferases [BR:
tsj01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
L3K52_08440 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
tsj01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
L3K52_08440 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UOG93740
LinkDB
All DBs
Position
1615133..1617559
Genome browser
AA seq
808 aa
AA seq
DB search
MSQEVKQESALRRFFNGLWFAITLFGRVFRILLLVAMVLGLLLGIVYTLELDDKVREQFE
GRRWELPARVFARPLDLYAGQQLFADHLEQELKLLNYRSVDKPIETGQYHRNGSKFVVNT
RGFQFADDKEPARSINVNVASGKVSTLAYADGKNPLDLMRLEPVLIGNFYPRQNEDRVLV
RQQDVPPLLISGLVAVEDKKFYEHQGVNPMAIGRALVANVKAGHTVQGGSTLTQQLVKNF
YLTNERSWHRKLKEATMAFLLEMRYTKQDIMEAYLNEIHLGQDGDRAIHGFGLAAQFYFN
RPVWELKPDQIALLIGLAKGAGYYDPRLHPDRALTRRNLVLQVMLSEKVITPAVYADALA
QPLGVNEKKPSGNSPFPAYLDLVRQQLQRDYKEEDVRSQGLMIFTAMDPIVQLTAETILQ
NRVRRLERAERIPKGKLNGALIISSVQGGEVMALVGSRDVRYAGYNRALTAQRQIGSLVK
PAIYLAALGNPKKYNLATRISDGPVTVKLGAKKFWQPRNYDHSNMGAVTLLRAITLSRNT
PAVRVGVGVGVDNIVQTLHDLGIAGEIPAYPSILLGALEMAPIDVQQMYQTLASGGSYSP
LKAIRSVMNPRGQVLTRYPLTVKQVASPEAADLLAYALHRVTVEGTAKELASTLPSWKKV
AGKTGTTNDKKDSWFAGFSGQHVVTVWVGRDDNKPTNMTGGTGALKVWSDLFKVLPTKPL
QVASSSRLVWVDVDQSTGLRFNPACGKAIRTPFIKGTQPQQTSYCAPPKPVEPVAPATAP
AAAAPAAPAAAPAKQPSDRSGWIDDLMR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcaggaagtaaaacaggaatcggcattacggcgtttcttcaacgggctatggttt
gccatcacgctgtttgggcgggtgttccgtatcctgctgttggttgccatggtattgggt
ttgttgctggggattgtgtacaccttggagctggatgataaggtgcgcgaacagtttgaa
ggacggcgttgggaattgcccgcacgggtgttcgcccggcccttggatctttacgccggt
cagcagttattcgcggatcatctggaacaagaactcaaattactcaactaccgttctgtc
gataagccgatcgaaaccgggcaataccatcgcaacggcagcaagtttgtggtgaatacc
cgtggtttccagtttgccgatgacaaagagccagcgcggagtatcaatgtcaatgttgcc
agcggtaaagtgtcaacactggcgtatgccgatggcaaaaatcccttggatttgatgcgt
ttagagccagtattgatcggtaatttctacccgcgtcaaaatgaagaccgcgtattggtg
cgccaacaagatgtacctccgttactgatttccggcttggtagcggtggaagacaaaaag
ttttacgagcaccaaggcgttaatcccatggccattggacgggcattggtggcgaacgtt
aaagcagggcacaccgtgcaaggcggcagcaccttaacgcaacagttggtgaaaaatttc
tacctcaccaatgaacgcagttggcatcgcaagcttaaagaggcaacgatggcctttttg
ctggaaatgcgttacaccaaacaagacattatggaagcctacctgaatgaaattcatctg
gggcaagatggcgaccgcgcgattcacgggtttggattggcggcacagttttacttcaat
cgcccggtgtgggagttgaaacccgatcagattgcgctcttgattggtttggcgaaaggc
gcgggttattacgacccgcgtttgcaccctgaccgcgcattaacccggcgcaatttggtg
ttgcaggtgatgcttagcgaaaaagtgattactcccgccgtgtatgctgatgcattagcg
cagccgttgggggttaatgagaaaaaaccatctggcaatagcccgttcccggcttacttg
gatttggtgcgccagcaattgcagcgtgattacaaagaagaagatgtgcgtagccaaggc
ttgatgatcttcacggcgatggatccgattgtgcaattaaccgccgaaaccattctgcaa
aaccgggttaggcgtttggagcgggctgaacgtattcccaaaggcaagctgaatggcgca
ttgatcatcagcagtgtgcaaggcggtgaagtcatggcgttggtgggcagccgtgatgtg
cgctacgccggttataaccgtgcgttgacggcacaacgtcagatcggctcattggtcaag
cccgcgatttatttggcagcgttggggaatcccaaaaaatacaatctggcaacccgcatc
agtgacggcccggtgacggtgaaattgggcgcgaagaaattctggcaaccgcgcaattac
gaccattccaatatgggtgcggtgacgttgttgcgagccattacgttgtcgcgcaatacc
cctgctgtgcgtgtcggtgtcggtgtgggagtggataatattgtccaaacgttgcacgat
ttgggcattgcgggtgagattccggcttatccctcgattttgctgggggcgctggaaatg
gcaccgattgatgtccagcaaatgtaccaaacgttggcatccggcggttcgtattcgccg
ttgaaagcgattcgtagcgtgatgaatccgcgtgggcaagtattgacccgctacccgctg
acggtgaaacaagttgccagccccgaagccgccgatttgctggcgtatgccctgcaccgc
gtcactgtcgagggaaccgctaaagagttagcatcgacactgcccagttggaaaaaagta
gcgggtaaaaccggcacgaccaacgacaaaaaagacagttggttcgccggattttccggg
caacacgtggtgacggtatgggtcgggcgtgatgacaataaacccaccaatatgaccggc
ggtacgggtgcgctgaaagtgtggtcggatttattcaaagtgttgccgacgaagccgctt
caggtcgccagttcttcgcgcttggtctgggttgatgttgaccagtctaccgggctgcgg
tttaatccggcctgcggtaaagccatccgtactccgtttattaagggtacgcaaccgcag
caaaccagttattgtgcgccacccaagccagtcgaacctgttgcgcctgcgactgccccc
gctgctgccgcacccgctgcgcctgccgcagctccggctaagcagccatcggatcgttct
ggctggattgatgatttgatgcgatga
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