Candidatus Thiothrix sulfatifontis: L3K52_09060
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Entry
L3K52_09060 CDS
T09924
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsj03016
]
L3K52_09060 (truB)
Enzymes [BR:
tsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L3K52_09060 (truB)
Transfer RNA biogenesis [BR:
tsj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L3K52_09060 (truB)
Prokaryotic type
L3K52_09060 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
XPC-binding
DUF3135
Motif
Other DBs
NCBI-ProteinID:
UOG93853
LinkDB
All DBs
Position
1748176..1749099
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AA seq
307 aa
AA seq
DB search
MSKRRFRKLNGILLLDKGLGVSSNKALQDARFLFQAEKAGHTGSLDPLASGMLPVCFGEA
TKVSAFLLDSDKRYLTTATLGYVSTTGDAEGEKLNPRPIPEISDAMLEAVLAQFRGEISQ
IPPMYSALKKDGQPLYKLARQGVEVERAARAVTIHSLQVLSRTADTLTLDVVCSKGTYIR
TLVEDIGEKLGCGAYVSMLRRESVEPFGASGMHTLEKLRALAEQDPQALDALLLPLDAAL
PHLAALTLDETVIVRLRQGQKVRTDDADAELLRLYSESGEFIGLGAAVNGVIIPKRLLAH
SPPAFTV
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaagcggcgttttcgcaaactgaatggcattttattgttggataaaggcttaggc
gtatccagcaataaagccttacaagatgcgcgtttcctcttccaagcggaaaaagccggg
cacacgggcagtctcgatccgctggcttctggcatgttgccagtctgttttggtgaagcc
accaaggtttctgcctttctgctcgattccgacaagcgttatctgaccaccgcaaccttg
gggtatgtgagtaccacgggtgatgcggaaggtgaaaagctcaatccgcgccccattcct
gagattagcgatgcgatgctggaagcggtgttggcgcaattccgtggcgagattagccaa
attcccccgatgtattccgcgttgaaaaaagacgggcaaccgctttataagctggcgcgg
caaggcgtggaagtggaacgtgcggcgcgtgcggtgacgattcattccctgcaagtgttg
tcacgcaccgccgatacgctaacgttggatgtggtatgcagcaaaggcacgtacatccgc
acgctggtggaagatattggcgaaaagctgggttgtggcgcgtatgtttcgatgctgcgg
cgtgaatcggtcgagccgtttggcgcatcgggtatgcacacgttggaaaaactgcgagca
ctagcggagcaagatcctcaagccttggatgcgctgttgttgccactggatgccgcgtta
ccgcacctagcggctctcactctggatgaaacggtgattgtgcgcttgcgtcaggggcaa
aaagtacggactgacgatgccgatgccgaactgctgcgtttgtacagcgagtccggcgaa
ttcatcggtttaggcgcagccgtcaacggggtgattatccctaagcgcttactggctcat
agcccgcccgcattcacggtgtaa
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