Candidatus Thiothrix sulfatifontis: L3K52_11575
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Entry
L3K52_11575 CDS
T09924
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsj03400
]
L3K52_11575
DNA repair and recombination proteins [BR:
tsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
L3K52_11575
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
ResIII
AAA_30
TrwB_AAD_bind
AAA_10
Zot
T2SSE
ATPase
Motif
Other DBs
NCBI-ProteinID:
UOG90837
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Position
complement(2299202..2300722)
Genome browser
AA seq
506 aa
AA seq
DB search
MSQPSGILIGKGEEQVFLNPRFANRHGLIAGATGTGKTISLQVLAEGLSRIGVPVFLADI
KGDLTGISKPGNPHPKVDERVAKIGIDDFRFEGCPTVIWDLSGERGHPVRATISDMGPLL
LAQLLELNDTQEGVLNIAFKVADEQGMLLLDLKDLRAMLQYLGENSKTFSNTYGNVSSAS
IGAIQRQLLVLEQQGADQFFGEPALDLWDFMRTGANGYGNINILAADRLINTPRLYATFL
LWLLSELFENLPEVGDMEKPRLVFFFDEAHLLFNGASKSLVQKVEQVVKLIRSKGVGIYF
ITQTPLDVPESVLGQLGNRVQHALRAFTPRDQKAVRTAAETFRQNPNLDTAETIMQMGVG
EALVSVLDDKGIPTVVQHTLIRPPQSRIGSLTEEERSEILRTSPFAGRYDNLVDRESAYE
LLQKRAVSAATEAAEQEAEAAAQKAERRTNSGARRVADREPEADNLLGSIGETFMKNAVK
AATSSAGRRIGTQIVRGLLGSLFKGR
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccgagcggaatcctgatcggcaagggcgaagaacaagttttcctgaaccca
cgctttgccaatcgccacggcctgattgcgggtgcaaccggcacggggaaaaccatttcc
ctgcaagtcttggcggaaggattatcccgcattggtgtgccggtgttcctagcggacatc
aaaggcgacctcaccggcattagcaaacccggcaacccgcaccccaaagtggatgagcgc
gtcgctaaaattggcattgacgatttccgctttgaaggctgccccaccgtcatttgggat
ttatccggggaacgtgggcatccggtacgtgccaccatttccgacatggggcctttgctg
ctggcacaactgcttgaattgaatgacacccaagaaggcgtattaaacatcgcgttcaaa
gtggcggacgaacaaggcatgttgctgctagatctgaaagatttacgcgccatgctgcaa
tacctcggcgaaaacagcaaaacctttagcaatacttacggcaatgtcagttccgcctcc
atcggcgcgattcaacgccaattgctggtgctggaacaacaaggtgctgaccaattcttc
ggcgagcctgccttggatttgtgggatttcatgcgcaccggggcaaacggttacggcaat
atcaatatcctcgccgctgatcgcttgatcaatacgccgcgcttgtatgccacattcctg
ctgtggttgttatctgaactgtttgagaacttgcccgaagtcggcgatatggaaaagccg
cgcctcgtgttcttctttgacgaagcgcacttactgttcaatggcgcatccaagtcactg
gtgcaaaaggttgagcaagtcgtcaagctgatccgctccaaaggtgtggggatttacttc
attacccaaacaccgctggacgtgccggaatccgtgctggggcaactcggcaatcgcgtg
caacacgcactgcgggcattcacgccgcgtgaccaaaaagcggtgcgcacggctgccgaa
accttccgccaaaacccgaatctcgacaccgctgaaaccattatgcaaatgggtgtgggc
gaagcgctggtttcggtcttggatgacaagggcattcccaccgtcgtgcaacacaccctt
atccgcccgccgcaatcacggattggctcactcacggaagaagaacgcagcgagattttg
cgcaccagcccgtttgcagggcgttacgacaatctggtggatcgtgaatcggcttacgaa
ctgttgcaaaaacgcgctgtcagcgctgccaccgaagcggctgaacaggaagcggaagcc
gccgcacaaaaagccgaacggcgtactaacagtggggcgcgtcgcgttgccgaccgtgaa
cctgaggccgacaacttattgggcagtattggcgaaaccttcatgaaaaatgcggtgaaa
gcggcaacctccagcgcggggcgacgcatcggcacacaaatcgtgcgcggtttgctcggc
tcattattcaaaggacgctag
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