Candidatus Thiothrix sulfatifontis: L3K52_12120
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Entry
L3K52_12120 CDS
T09924
Name
(GenBank) ribulose-bisphosphate carboxylase
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj00630
Glyoxylate and dicarboxylate metabolism
tsj00710
Carbon fixation by Calvin cycle
tsj01100
Metabolic pathways
tsj01110
Biosynthesis of secondary metabolites
tsj01120
Microbial metabolism in diverse environments
tsj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
L3K52_12120
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
L3K52_12120
Enzymes [BR:
tsj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
L3K52_12120
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
UOG90942
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Position
2421750..2423129
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AA seq
459 aa
AA seq
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MDQSGRYADLSLKEEDLIAGGKHILVAYKMMPQPGHGYLEAAAHFAAESSTGTNVEVSTT
DDFTKGVDALVYYIDEATEDMRIAYPLDLFDRNITDGRMMVVSMLTLIIGNNQGMGDIKH
AKIHDFYVPERAIQLFDGPSKDISDMWRILGRPVVNGGYIAGTIIKPKLGLRPEPFAAAA
YQFWLGGDFIKNDEPQGNQVFCPAKKVYPLVYDAMKRAQDETGQAKLFSANITADDHYEM
CARADFILEAFGPDADKVAFLVDGFVGGPGMITTARRQYPNQYLHYHRAGHGMITSPSAL
RGYTAFVLAKLSRLQGASGIHVGTMGYGKMEGENSDKLIAYMIERDECQGPVYNQKWYGM
KPTTPIISGGMNALRLPGFFENLGHGNVINTSGGGSYGHIDSPAAGAISLRQSYECWKAG
ADPIEFAKEHKEFARAFESFPGDADKIYPGWREKLGVHK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggaccaatctggacgttacgcggatcttagcctgaaagaagaagacctgatcgcaggt
ggcaagcacattctggttgcttacaaaatgatgccacagccgggtcacggctatttggaa
gcggctgctcactttgcagcagaatcttctacgggtactaacgttgaagtgtctaccacc
gatgatttcaccaaaggcgttgacgcgctggtgtactacatcgacgaagccactgaagac
atgcgtatcgcgtatccattggacttgtttgaccgcaacatcaccgatggtcgtatgatg
gtcgtgtctatgttgacgctgattatcggcaacaaccaaggcatgggcgacatcaaacac
gccaaaatccatgacttctacgtgcctgagcgtgctatccaattgttcgatggtccatcc
aaagacatctctgacatgtggcgtattctgggtcgtccagtggtcaacggtggttacatc
gcgggtacaatcatcaagcctaaactgggtctgcgccctgagccattcgcggcggctgca
taccagttctggcttggcggcgacttcatcaagaacgatgaaccgcaaggcaaccaagtt
ttctgcccagcgaaaaaagtttacccactcgtatacgacgcaatgaagcgtgcgcaagac
gaaaccggtcaagcgaaactgttctctgcgaacatcaccgctgacgaccattacgaaatg
tgcgctcgtgctgacttcatcctcgaagcgtttggcccggatgcggacaaagttgcgttc
ttggttgacggtttcgtcggcggccctggcatgatcactaccgcgcgtcgccagtaccct
aaccagtacctgcattatcaccgcgcaggtcacggcatgatcacttccccgtctgcactg
cgtggttacaccgcgtttgtattggcgaaactgtcacgtctgcaaggtgcttccggtatc
cacgtcggcacaatgggctacggcaaaatggaaggcgaaaacagcgacaagctgatcgcg
tacatgatcgagcgtgacgagtgccaaggcccagtctacaaccagaagtggtacggcatg
aagccaaccacgccaatcatctctggcggtatgaacgcgctgcgtctgccgggcttcttc
gagaacttgggtcacggtaacgttatcaacacctccggtggtggttcttacggtcacatt
gacagcccagcggctggcgcaatctccctgcgtcaatcgtatgagtgctggaaagcgggt
gctgaccccatcgaatttgcgaaagagcacaaagaatttgctcgcgcattcgagtcattc
cctggcgatgctgacaagatctacccaggctggcgcgaaaagctgggcgtacacaagtaa
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