Candidatus Thiothrix sulfatifontis: L3K52_12640
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Entry
L3K52_12640 CDS
T09924
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tsj
Candidatus Thiothrix sulfatifontis
Pathway
tsj00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
L3K52_12640
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tsj01007
]
L3K52_12640
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsj03016
]
L3K52_12640
Enzymes [BR:
tsj01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
L3K52_12640
Amino acid related enzymes [BR:
tsj01007
]
Aminoacyl-tRNA synthetase
Class I (U)
L3K52_12640
Transfer RNA biogenesis [BR:
tsj03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
L3K52_12640
Prokaryotic type
L3K52_12640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
ABC_tran_CTD
tRNA-synt_1b
DASH_Spc19
Motif
Other DBs
NCBI-ProteinID:
UOG91044
LinkDB
All DBs
Position
2531894..2534743
Genome browser
AA seq
949 aa
AA seq
DB search
MDKTYQPQDIEQRWYQHWEQSGYFAPKGEGKPYCIMIPPPNVTGTLHMGHGFNQMVIDTL
IRYHRMKGDKTLYQPGTDHAGIATQMVVERQLLAQGVTRHDLGREAFLEKVWEWKGQSGD
TINRQLRRLGTTPDWSRERFTMDEGLSEAVREVFVRLHEEGLIYRGKRLVNWDTVLHTAV
SDLEVVSEEENGNMWHFRYPLADAAGNATDEFLIVATTRPETMLGDSAVAVNPKDERYQH
LIGKNVVLPLVGRLIPVVGDDYADPEKGTGCVKITPAHDFNDYQVGKRHNLPLINIFTVD
ACLNEVAPAQYQGLERYAARKQMVADMDALGLLDKIEDHKLMVPRGDRSGTVIEPYLTDQ
WYVDLTRETLDDGRPGGKTAIAQPAIDVVASGEVRFIPGNWVNTYNHWMNNLDDWCISRQ
LWWGHRIPAWYDDAGNVYVARSEDEVRSKYSLPADFALRQDEDVLDTWFSSALWPFSTLG
WPNVDDEALKAFYPTQMLMTGFDIIFFWVARMIMFGKKFMGDVPFRDVYIHGLVKDADGQ
KMSKSKGNVLDPLDIIDGIDLEALVAKRTSGMMQPQLAAKIDKATRKQFPDGITPHGTDA
LRMTFASFATAGRDIRFDMQRLEGYRNFCNKLWNAARYVLMQCDASATLSDRSLSEAEGN
TETVELSAADRWIISLLQQTEAEVADHIDNYRFDLAAKAMYEFAWHEYCDWYLELTKPIL
GKANDNQAAKRGTRRTLVRVLEAALRLMHPIMPFITEEIWQNIKGLAGVSGDSIMLQPYP
VADTALIDQAALAEIEWVKAFIMGIRRIRSEMDIKPGQVLDVLLQNWSDTDKALFTTSEA
FARTLAKVGNVTWLEAGADAPESATALVGEMQILIPLAGLIDKDAEIARLSKEIEKLQKN
LGGLEGRLNNPAFADKAPAAVLEQTRKQADEQRAALGQLVGQLEKIRAL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggacaagacctaccaacctcaagacatcgaacaacgctggtatcagcactgggaacaa
agcggctatttcgcccccaaaggcgagggcaagccgtattgcatcatgatcccgccgccg
aacgtcaccggcacactgcacatggggcacggtttcaaccagatggtgatcgacaccctg
atccgctaccaccgcatgaagggcgacaaaaccctctaccaacccggcactgaccacgca
ggcatcgccacgcaaatggtggtcgaacgccaattgctggcgcaaggtgtaacccgccac
gatctggggcgtgaagctttcctcgaaaaagtctgggagtggaaagggcaatctggcgat
accatcaaccgccaattgcgccgtttggggacgactcctgactggtcacgcgaacgcttt
acgatggacgaaggcttgtcggaagcggtgcgcgaagtgtttgtgcgcctgcatgaagaa
ggcttgatctatcgcggcaaacgcttggtgaactgggataccgtgctgcacaccgccgtt
tccgaccttgaagttgtgtccgaagaagaaaacggcaatatgtggcacttccgctacccg
ctggcggatgcggcgggcaatgccaccgacgaattcctgatcgttgccactacgcgcccg
gaaaccatgctgggtgactccgccgtggcggtgaacccgaaagacgagcgttaccagcat
ttgattggcaaaaacgtggtgctgccgctggtgggacgcttgattccggtggtcggcgac
gattacgctgacccggaaaaaggcacgggttgtgtgaagattaccccggcgcacgatttc
aacgactatcaggtgggcaagcgtcataacctgccgctgatcaatattttcactgttgat
gcctgcctcaatgaggttgcaccagcacaataccaaggcttggagcgttacgctgcccgc
aaacagatggtggcggacatggatgcgctcggcttgctggataaaatcgaagaccacaag
ctgatggttccgcgtggcgaccgttccggcacggtgattgagccgtacctgaccgatcag
tggtacgtggatttgacccgcgaaacgctggatgacgggcgacccggcggcaaaactgcg
attgcacaaccggcgattgacgtggtggcgagcggcgaagtgcgcttcattccgggcaac
tgggtgaacacctacaaccactggatgaacaacctcgacgactggtgcatttcgcgccaa
ttgtggtgggggcatcgtattccggcatggtatgacgacgcgggcaatgtctacgtggcg
cgttccgaagatgaggtgcgcagcaaatacagcctgcctgccgacttcgcgttgcgtcag
gacgaggacgtgctcgatacgtggttctcctccgcactgtggccgttttcgacgctcggc
tggccgaatgtggacgacgaagccctgaaagccttctaccccacgcagatgttgatgact
ggctttgacatcatcttcttctgggtggcgcggatgatcatgttcggcaagaaattcatg
ggcgacgtgccgttccgcgacgtgtacatccacgggctggtgaaggatgcggacgggcag
aaaatgtccaaatccaagggcaacgtgcttgacccgctcgacattatcgacggcatcgac
ctcgaagcactggttgccaagcgcaccagcggcatgatgcagccgcaactcgccgccaaa
atcgacaaagccacccgcaagcaattccccgacggcattaccccgcacggcacggatgcg
ctgcgcatgacgtttgcctcgttcgccaccgctggacgcgacatccgtttcgacatgcaa
cggctggaaggctaccgcaatttctgcaacaagctgtggaacgcggcgcgttacgtgctg
atgcagtgcgacgcttcggctacgctcagcgaccgttccctgagcgaagccgaagggaac
acggagacagtggaattgtcggcggcggatcgctggatcatttccttgctgcaacagacc
gaggcggaagtcgccgaccacatcgacaactaccgcttcgaccttgccgccaaagcgatg
tacgaatttgcgtggcacgaatactgcgactggtatctggagctgaccaagccgattttg
ggcaaagccaacgacaaccaagccgccaaacgtggcacgcgccgtaccttggtgcgcgtg
ctggaagcggcgttgcgcctgatgcacccgatcatgccgttcatcaccgaagaaatctgg
cagaacatcaaaggcttggcgggcgtatccggcgattccatcatgctgcaaccctacccc
gtcgccgacactgcgctgattgatcaggcagcactggcggaaatcgaatgggtgaaagct
ttcatcatgggcatccgccgcatccgctccgaaatggacatcaagccggggcaagtgctg
gatgtgctgctgcaaaactggagcgacaccgacaaggcactgttcaccaccagcgaagcg
tttgcgcggacgctggcgaaagtcggcaacgtgacgtggctggaagccggggcggatgcg
ccggaatcggctacggcgctggtcggcgagatgcaaatcctcatcccgctggcggggctg
atcgacaaggacgcggaaattgcgcgtctgagcaaggaaatcgagaagctgcaaaagaac
ctcggcgggctggaaggtcggctgaataatccggcgtttgcggacaaagctccggcagca
gtgctggaacagacgcgcaagcaggcggatgagcagcgggcagcgttgggacagttggtg
gggcagttggagaagataagggcgttgtga
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