Candidatus Thiothrix sulfatifontis: L3K52_15460
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Entry
L3K52_15460 CDS
T09924
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsj03021
]
L3K52_15460 (rpoS)
Transcription machinery [BR:
tsj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L3K52_15460 (rpoS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UOG91575
LinkDB
All DBs
Position
complement(3098084..3099103)
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AA seq
339 aa
AA seq
DB search
MSRPQTHIDSKEALAFVASEASDVIELEDDIEDESLLSDSDDEEASSLTESANVTAIASS
MDVDATQMYLREIEFSPLLTPDEEVLYGRLARDGDEFGRKKMITCNLRLVVKIARRYMGR
GLPLPDLIEEGNLGLIHAVEKFDPERGFRFSTYATWWIRQNIERALMNQTRTIRLPIHVN
KELNAYLRKVREMTQKLGYEPSLPEVAEALDKPIEVLRKLLDFNERITSLDVTVGKDSDS
PLVDFVSAETCDEPDSKLEDEDVTQSVDGWLAQLEFKQKEVIVRRFGLHGHERATLEQVG
EALGLTRERVRQIQMDALKRLRRILENKGFSGENLLGIG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaccacagacccacattgacagcaaagaagcgcttgcttttgttgcatcagaa
gccagcgacgttattgagctggaggatgatattgaagatgaaagcctcctgagcgatagc
gatgatgaagaggcgtcaagtctcactgaaagcgctaatgtgactgccatcgcctcatcg
atggatgttgacgctactcaaatgtatttgcgggaaatcgagttttcgccactgttgacc
cccgatgaagaagtgctctatgggcgtcttgcccgtgacggcgatgagtttgggcgcaag
aaaatgattacctgcaatttgcgcttggtggtaaaaattgcccgtcgttacatgggacgt
gggttgccattgccggatttgattgaagagggcaatttgggtttgattcatgcggtcgaa
aaattcgatcctgaacgcggcttccgcttctcaacgtatgccacttggtggattcgccaa
aacattgaacgggcgttaatgaaccaaacgcgcaccatccgtctgccaattcatgtgaat
aaagagctgaatgcttatttgcgcaaagtgcgtgaaatgacccaaaagctggggtatgag
ccttcgctgccagaagtggcagaagcactggataagccgattgaagttttacgcaagtta
ctcgatttcaatgagcgcattacgtctttggatgtgacggttggtaaagacagtgatagc
ccgctagtagactttgtaagcgctgaaacctgtgatgagcctgacagcaagcttgaagac
gaagacgttacgcagtctgttgatgggtggttagcgcagcttgaattcaagcagaaagaa
gtcattgtgcggcgtttcggtttgcatggtcatgagcgtgcgacgctggagcaagttggt
gaagccttgggtttgacacgcgaacgcgtccgccaaattcagatggatgcactgaaacgt
ttacggcgtattcttgaaaacaagggtttttctggcgagaatttgctaggtattggttaa
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