Candidatus Thiothrix sulfatifontis: L3K52_15815
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Entry
L3K52_15815 CDS
T09924
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsj03000
]
L3K52_15815
Transcription factors [BR:
tsj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
L3K52_15815
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
SBP_bac_11
HTH_5
Motif
Other DBs
NCBI-ProteinID:
UOG91642
LinkDB
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Position
complement(3169876..3170802)
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AA seq
308 aa
AA seq
DB search
MPYSLSQIRIFEAVAQYESYTRAAEKLFMTQPAVSMQIKQLEEDSGLALFERQGKKMCLT
PIGREVQHYASRVLQAHNDMLGVMKELKGTKGGHLVVSVATTANYFVTQLLAEFSQQHEG
INITLDVTNRHTLLDQLENHEPDMVIMGEPPKGHGLQSERLMENPLVVIAAPTHPLVEIG
RPLLLSDVLAERFIVREKGSGTRSAIERHLHKHNASCKNSLEMRSNETIKHAVEAGLGLG
IVSMHTIQPELDSGRLVILPVENFPIHRHWHVVMRKGKRLSPIAREFKQFVMAEAPRFVR
NASPRIVA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgccgtactcattaagccaaatccgcatttttgaagcggtggcacaatacgaaagttac
acccgtgcggcggaaaagctgttcatgacgcaaccggctgtttccatgcaaatcaagcag
ttggaggaggatagcgggctggcattgtttgagcgccaaggcaaaaaaatgtgcttaacc
ccgattggcagggaagtgcagcattacgccagccgcgtcttacaagcccacaacgacatg
ctgggagtgatgaaagagctcaaaggcacgaagggtgggcatttggttgtctcggtggcg
accacggctaattatttcgtcacgcaattgctggcagaattttcacaacagcacgaaggc
atcaatatcacgctggatgtgaccaaccgccacaccttgctggatcagttggaaaaccac
gagccggacatggtgattatgggcgaaccgccgaaaggtcatggtttgcagtcggagcgt
ttgatggaaaatccgctggtggtaattgccgcgccgacgcatccgctggtagagattggt
cgcccgttattgctgagtgatgtgttggcggaacgctttatcgtgcgcgagaaagggtcg
gggacgcgcagcgcgattgagcggcatctgcataaacacaatgccagttgcaaaaattcg
ctggaaatgcgcagcaatgaaaccatcaaacacgcggtggaggcgggtttggggctggga
attgtgtcgatgcacacgattcagccggaactggatagcgggcggttggtgattttgccg
gtggaaaatttcccgattcatcgtcattggcatgtggtgatgcgcaaaggcaaacggctg
tcgccgattgcacgcgagtttaagcagtttgtgatggcggaagcgccgcgttttgtacgg
aatgcatctccacggattgtggcatga
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