Candidatus Thiothrix sulfatifontis: L3K52_16435
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Entry
L3K52_16435 CDS
T09924
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
tsj
Candidatus Thiothrix sulfatifontis
Brite
KEGG Orthology (KO) [BR:
tsj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tsj02044
]
L3K52_16435
02035 Bacterial motility proteins [BR:
tsj02035
]
L3K52_16435
Secretion system [BR:
tsj02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
L3K52_16435
Bacterial motility proteins [BR:
tsj02035
]
Pilus system
Pilus assembly proteins
L3K52_16435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
VWA_2
VWA
Motif
Other DBs
NCBI-ProteinID:
UOG91755
LinkDB
All DBs
Position
complement(3295357..3299055)
Genome browser
AA seq
1232 aa
AA seq
DB search
MKITKATLRALLLTMPLLFASVLMADETEIYFTDKSGEVAPNVLFVIDASGSMSQVVTGD
ASGRTRLKVLKDSFQEVMSTAPTNLNVGLMHYANHGLGADYWWSSIKGANFPVTPIDATV
EPLITSYQVDDNLPDPATSSTVVREFLSSIVNSWDANGYTPIVDSLYEAARYFRGDSVEW
GMDVPKIGWAAHPLTYDNAPTCTAPRQEDCVKSWGQCNTNIVSGSCTTTSHNECCAWITT
GGDGSGYCKNDDYTCSAVIEKCKHTVCDAVAGAPVYKSPIQYSCQANYLVLMSDGKPEYP
YFPGLGDKDGTRYYPPSVKSLAMSDFNPMPAPDWTTYFTGLVATNNSQIKVAPPLPDYLG
AAANNCGTSAAAPHGYNSGRCGPELTRWLADTDHNDTLQGKQAVDTYTVAFALGDEPTGT
AYLKDLATKQDGAFTADNAEELAGAFKAILSSISKASSSFSSPTYAIDTDNMLSHSDEVY
IPMFDRSTTALWSGNLKKFARTVDGKIVGGTLIRDAQNRVTAGDPVVNDKGEFLDTADDL
WGVASGSDVTGGGAASQLPLPDNRNLYTDVSANSDLTSAANALSVSNTNNLTDGKLLGLP
DNPAEKVKYWLPDADGDGTSCLGYYKDCDGNNHVVLGNYDTKVGCVTISSVAITCPGTDY
LTDPERENLIDFARGEIDDPTSADPDVTIPRQQMGDMLNSKPLVVDYGNGEERIFAATNE
GFLHSINTGDGEEQWAFMPKDLLPNIKTFMENLPTKDHVYGIDGPLTLWNYDKNLDGKLK
ATDGDKRVLFFGLRRGGKAYYALDITNPDSPLILWKKDSTLSVDSNAWKELGETWSKPTL
AKMRIGSSTASEIRNVLVFGAGYDAAKDAETGRQADQLGNDVMIVDALTGDLYWSLQRDV
YGGNAATNPVKHSVPGDIRVLDMDRNGTLDRLYFADTGGNLWRVDMDHDLRDSDPDMYNY
DDAILTKIAELGENGSHGTDTRKFFYEPDTALIQHNGKVRMTISLGSGYRTHPLNTNTED
RFYVLMEPNVYNEPPAGFTALKNADLVDAKTSFTDPNDNLLTGTYKGWYYDFAHKGEKVL
APAVTFLNKVVFTTFAPVDEAGNETPDDPCIVPPNSARAYVLDLFTGKAVADLDRDTATG
TDGKDEYVVAGFNEILDAAKIIFRMPSAADGGDCAVGDCEQTVEIRVGKLEMPVLDASND
EDGGTGLGGVAGSVDLTDILPRMFWLDHNVSD
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattactaaagctactcttcgagcattgttattgactatgcctctgttgtttgcc
agcgttttgatggcagacgaaaccgaaatctactttactgacaaaagtggtgaagtggcg
cccaacgtactgtttgtgattgatgcatcgggcagcatgagccaagtcgtgacaggtgat
gccagcggccgcacccggctaaaggtgctgaaagattcgttccaagaagtgatgagtacc
gcaccgaccaatttaaatgtagggctaatgcactacgctaaccatggcttgggcgccgat
tattggtggagttcgatcaaaggggcgaattttccggttacgccaattgatgcaacagtt
gagccactgattacctcgtaccaagtcgacgataatttaccggatccggcgacgagcagc
acggtggtgcgcgaatttttgtcaagcattgtcaacagttgggatgctaacgggtatacg
ccgattgtggattccttgtacgaagcggcgcgttactttcggggtgactcggtggaatgg
ggcatggatgtacccaaaatcggctgggctgcgcacccgctaacctatgataacgcccca
acctgtaccgcccctcgtcaggaagattgcgtgaagagttgggggcagtgcaacaccaat
atcgtgtccggcagttgcacgaccaccagccataatgagtgctgcgcatggattaccacg
ggtggtgatggctcaggttactgcaaaaacgatgactacacctgttctgccgtgatcgaa
aaatgcaagcacaccgtttgcgatgccgtggcaggcgctcctgtctacaaatcgccgatt
caatacagttgccaagccaattacttggtattgatgtcggatggcaagcccgaataccct
tattttcccggcttgggggataaagacggtacgcgttattacccgccttcggtaaaaagt
ttggcaatgagcgatttcaatcccatgcccgcccctgattggaccacgtattttaccggc
ttggttgcgacgaacaatagtcaaattaaagtggcaccgccgttaccagactaccttggt
gctgctgccaacaattgtggcaccagtgctgcggcgccgcacggctataacagcgggcgt
tgcgggcctgagctgacccgttggttggcagatactgaccacaatgatacgttgcaaggc
aaacaagctgtcgatacctatactgtcgcgttcgccttgggcgatgagccaaccggcacg
gcgtatttgaaagatctggcaacgaaacaagacggtgcttttaccgctgacaatgcggag
gaattagcaggcgctttcaaggccattctgagttcgatcagcaaggcatcttcctcgttc
agctcaccgacttacgcgattgacaccgacaatatgctgtcacacagcgatgaagtttac
atcccgatgtttgaccgcagcaccacggcgctttggtccggcaacttgaaaaaatttgct
cgcaccgtggatggtaaaatcgttggcggcacgctaatccgtgacgcccaaaaccgggta
acggcaggagacccggtggtgaatgacaaaggcgaatttttggatacagcagatgactta
tggggagtggcgagcggttcggatgtcacaggcggtggtgctgccagtcaattgccgcta
cccgacaatcgcaatctgtacaccgatgtgagtgccaacagtgatctaacttccgccgca
aatgccttgtctgtcagcaataccaataatttaaccgatggcaaattattgggcttgccg
gataatccggcggagaaggtcaagtattggttgcccgatgccgacggtgatggcaccagt
tgcttgggctattacaaggactgcgatggtaataatcacgttgttctgggtaactacgat
accaaggtagggtgtgtcaccatttccagcgtggcgattacctgccccggaaccgattat
ttgaccgaccctgagcgtgaaaacttgattgattttgcacgcggtgaaatcgacgacccg
actagcgccgaccctgatgtgacgattccgcgtcaacaaatgggggatatgctcaacagt
aaaccgttggtggtggactacggtaacggcgaagagcgtattttcgcggcaaccaacgaa
ggtttcctgcattccattaataccggagacggcgaagaacaatgggctttcatgccaaaa
gatttgctgcccaacatcaaaaccttcatggaaaacttaccgaccaaagaccacgtttac
ggcattgacggcccgctaaccttgtggaattacgataaaaatctggacggcaaactcaaa
gccaccgacggcgataagcgcgtgttgttctttgggttgcggcgtggcggtaaagcctat
tacgccttggatattaccaacccggatagcccgttaattttgtggaaaaaagatagcacc
ctctccgtggacagcaatgcttggaaggagctgggcgaaacttggtcaaaacccaccttg
gcaaaaatgcgcattggcagttcaaccgccagtgaaatacgcaacgtgttggtcttcggt
gcgggttacgacgccgccaaagacgctgaaaccgggcgtcaagccgaccaactcggtaac
gatgtgatgattgtggatgctttaacgggtgatttgtactggtcattgcagcgcgatgtc
tacggtggcaatgccgccaccaatccggtcaaacacagtgtccccggtgatattcgggtg
ctggatatggatcgcaacggcacactcgaccggctgtatttcgcggataccggcggcaac
ctgtggcgcgtcgatatggatcacgatttgcgtgacagtgacccggatatgtacaactac
gacgacgcaatcctaaccaaaatcgccgaattgggtgaaaacggctcgcacggcacggat
acccgcaagttcttttacgaacccgacaccgcgctgattcaacacaatggcaaagtgcgc
atgacgatttcactgggcagtggctaccgcacacaccccttgaataccaacaccgaagac
cgcttttacgtgttgatggaaccgaatgtgtacaacgaaccgcctgctggcttcaccgcc
cttaaaaacgccgatttggtcgacgcgaaaaccagcttcactgacccgaacgacaacctg
ctgacgggcacgtacaaaggttggtactacgactttgcgcacaaaggggaaaaagtgctc
gcgccagcggtcacgttcctcaacaaagtcgtcttcaccacgtttgcgccggtggacgaa
gccgggaatgaaacgccggatgacccttgcatcgtgccccctaacagtgcccgtgcttac
gtgttggatttgttcaccggcaaagccgttgctgacctcgaccgcgacaccgcgacaggc
actgacggcaaagacgagtacgtggtggcgggtttcaatgaaatcctcgatgctgccaag
atcatcttccgtatgcctagcgcggcggatggtggcgattgcgccgtcggtgattgcgag
caaaccgtggaaatccgggtcggcaagttagaaatgccggttttggatgccagcaacgat
gaagacggcggcacaggtctcggtggggttgcgggcagtgttgatttgaccgacatctta
ccgcgtatgttttggttggatcacaatgtcagcgactaa
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